Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 GAPDHP21-201ENST00000450301 1010 ntBASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 AC026434.2-201ENST00000506094 1078 ntBASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 AC106760.1-201ENST00000508690 800 ntBASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 AC145423.3-201ENST00000615987 467 ntBASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
ECHDC1Q9NTX5 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 AC013726.1-201ENST00000563747 2285 ntBASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 TP73-213ENST00000604479 1623 ntTSL 5 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 AC005229.1-201ENST00000392885 409 ntBASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 RPL28-203ENST00000428193 573 ntTSL 2 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 RPL28-204ENST00000431533 590 ntTSL 2 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 KRT17P7-201ENST00000451704 1104 ntBASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
ECHDC1Q9NTX5 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 FGD5P1-202ENST00000614866 2498 ntBASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 SF1-209ENST00000433274 2317 ntTSL 2 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 AC023090.2-201ENST00000625182 2110 ntBASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ECHDC1Q9NTX5 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms