Protein–RNA interactions for Protein: Q9NR81

ARHGEF3, Rho guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3Q9NR81 CR382287.1-201ENST00000623954 586 ntBASIC16.21■□□□□ 0.19
ARHGEF3Q9NR81 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.21■□□□□ 0.19
ARHGEF3Q9NR81 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ARHGEF3Q9NR81 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ARHGEF3Q9NR81 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ARHGEF3Q9NR81 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
ARHGEF3Q9NR81 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
ARHGEF3Q9NR81 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.21■□□□□ 0.19
ARHGEF3Q9NR81 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
ARHGEF3Q9NR81 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
ARHGEF3Q9NR81 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ARHGEF3Q9NR81 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ARHGEF3Q9NR81 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ARHGEF3Q9NR81 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.21■□□□□ 0.18
ARHGEF3Q9NR81 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ARHGEF3Q9NR81 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ARHGEF3Q9NR81 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
ARHGEF3Q9NR81 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
ARHGEF3Q9NR81 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.21■□□□□ 0.18
ARHGEF3Q9NR81 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
ARHGEF3Q9NR81 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
ARHGEF3Q9NR81 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 CICP23-201ENST00000605013 2741 ntBASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 SLC25A24P2-201ENST00000415059 510 ntBASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 AC093433.1-201ENST00000458048 571 ntBASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 AP001258.2-201ENST00000529891 490 ntBASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 RN7SL190P-201ENST00000582519 257 ntBASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 AC005252.2-201ENST00000624630 1141 ntBASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ARHGEF3Q9NR81 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
ARHGEF3Q9NR81 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms