Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 HOMER2P2-201ENST00000451621 847 ntBASIC15.81■□□□□ 0.12
HPS4Q9NQG7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 AC010491.1-201ENST00000563101 2797 ntBASIC15.81■□□□□ 0.12
HPS4Q9NQG7 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 RN7SL48P-201ENST00000579283 293 ntBASIC15.81■□□□□ 0.12
HPS4Q9NQG7 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 AL008638.5-201ENST00000623814 1298 ntBASIC15.81■□□□□ 0.12
HPS4Q9NQG7 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HPS4Q9NQG7 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 AC112504.1-201ENST00000623415 1841 ntBASIC15.8■□□□□ 0.12
HPS4Q9NQG7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 NUS1P3-201ENST00000423502 862 ntBASIC15.8■□□□□ 0.12
HPS4Q9NQG7 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 MTX1P1-201ENST00000440904 838 ntBASIC15.8■□□□□ 0.12
HPS4Q9NQG7 RPSAP36-202ENST00000494591 1261 ntBASIC15.8■□□□□ 0.12
HPS4Q9NQG7 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 AC068587.10-201ENST00000641210 219 ntBASIC15.8■□□□□ 0.12
HPS4Q9NQG7 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
HPS4Q9NQG7 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms