Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 AL360270.3-201ENST00000609118 1348 ntBASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 AC107373.2-201ENST00000607735 490 ntBASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
LRRC40Q9H9A6 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 LILRP1-201ENST00000444199 1370 ntBASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 AC093525.8-201ENST00000624099 1342 ntBASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 AL353779.1-201ENST00000434793 351 ntBASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 INGX-202ENST00000489074 768 ntBASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 AC093004.1-201ENST00000508850 424 ntBASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
LRRC40Q9H9A6 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC40Q9H9A6 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC40Q9H9A6 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC40Q9H9A6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC40Q9H9A6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.52■□□□□ 0.07
LRRC40Q9H9A6 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.52■□□□□ 0.07
LRRC40Q9H9A6 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.52■□□□□ 0.07
LRRC40Q9H9A6 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC40Q9H9A6 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.52■□□□□ 0.07
LRRC40Q9H9A6 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
LRRC40Q9H9A6 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC40Q9H9A6 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
LRRC40Q9H9A6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC40Q9H9A6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.52■□□□□ 0.07
LRRC40Q9H9A6 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
LRRC40Q9H9A6 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.07
LRRC40Q9H9A6 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
LRRC40Q9H9A6 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC40Q9H9A6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC40Q9H9A6 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC40Q9H9A6 AL138799.1-201ENST00000448213 1675 ntBASIC15.51■□□□□ 0.07
LRRC40Q9H9A6 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC40Q9H9A6 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC40Q9H9A6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
LRRC40Q9H9A6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.51■□□□□ 0.07
LRRC40Q9H9A6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC40Q9H9A6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.51■□□□□ 0.07
LRRC40Q9H9A6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC40Q9H9A6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
LRRC40Q9H9A6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms