Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 AC010327.4-202ENST00000591484 748 ntBASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 AP000845.1-201ENST00000581677 2131 ntBASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
POLR2J3Q9H1A7 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 RPL37AP1-201ENST00000412502 279 ntBASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 RN7SL618P-201ENST00000477850 296 ntBASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 SDHAP3-202ENST00000515467 728 ntBASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 AC025181.2-201ENST00000606994 802 ntBASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
POLR2J3Q9H1A7 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.16□□□□□ -0.14
POLR2J3Q9H1A7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms