Protein–RNA interactions for Protein: Q9C0K0

BCL11B, B-cell lymphoma/leukemia 11B, humanhuman

Predicted RBP Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL11BQ9C0K0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 AL627231.1-201ENST00000394467 1125 ntBASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 AC097065.1-201ENST00000425737 517 ntBASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 AC073150.1-201ENST00000450406 1084 ntBASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 IRF3-215ENST00000596822 823 ntTSL 3 BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 AC009955.4-201ENST00000597192 544 ntBASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 NAP1L6-202ENST00000641404 1222 ntBASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
BCL11BQ9C0K0 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 PCDHB19P-201ENST00000570871 2371 ntBASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 LST1-206ENST00000376090 689 ntTSL 2 BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 LST1-209ENST00000376096 565 ntTSL 2 BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 LST1-210ENST00000376099 610 ntTSL 2 BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 SSR1P1-201ENST00000407630 814 ntBASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 LST1-214ENST00000418507 726 ntTSL 2 BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 AC012497.1-201ENST00000429392 575 ntBASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 RPL7P35-201ENST00000446943 740 ntBASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 MESTP3-201ENST00000503460 968 ntBASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 HNRNPA1P36-201ENST00000521313 955 ntBASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 AC005357.2-202ENST00000590507 1060 ntBASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BCL11BQ9C0K0 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 ME2P1-201ENST00000426028 1970 ntBASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 PPOX-204ENST00000462866 473 ntTSL 5 BASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 RPL18P13-201ENST00000478088 569 ntBASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 AC100827.2-201ENST00000563214 1194 ntBASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC19.74■□□□□ 0.75
BCL11BQ9C0K0 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms