Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 FBXW8-202ENST00000455858 4648 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
LCE3DQ9BYE3 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 AC113347.1-201ENST00000413321 391 ntBASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 HS6ST1P1-201ENST00000481504 1234 ntBASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 KRT18P34-201ENST00000488218 1270 ntBASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 MMP17-203ENST00000535004 719 ntTSL 3 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 QPRT-203ENST00000562473 579 ntTSL 3 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC4.15□□□□□ -1.75
LCE3DQ9BYE3 MIR3909-201ENST00000579518 119 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms