Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.51□□□□□ -0.09
TUBA1CQ9BQE3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 LINC01230-201ENST00000625222 3017 ntBASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 AL035633.1-201ENST00000406139 838 ntBASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 MIR4321-201ENST00000592276 80 ntBASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 LINC02560-201ENST00000596379 459 ntBASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 TCAF1P1-201ENST00000414990 2232 ntBASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.5□□□□□ -0.09
TUBA1CQ9BQE3 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 AC087499.5-201ENST00000452760 1342 ntBASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 FAM207CP-201ENST00000443486 507 ntBASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 AL139010.1-201ENST00000454878 894 ntBASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 TERF1P3-201ENST00000505638 1227 ntBASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 AL844908.2-201ENST00000609461 460 ntBASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 AC008761.3-201ENST00000624803 892 ntBASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 CICP17-201ENST00000418553 2377 ntBASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.49□□□□□ -0.09
TUBA1CQ9BQE3 CICP20-201ENST00000443330 2801 ntBASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms