Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.4■□□□□ 0.06
NDNQ99608 AL158211.3-201ENST00000607385 239 ntBASIC15.4■□□□□ 0.06
NDNQ99608 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.4■□□□□ 0.06
NDNQ99608 AL590560.3-201ENST00000623350 461 ntBASIC15.4■□□□□ 0.06
NDNQ99608 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NDNQ99608 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDNQ99608 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.4■□□□□ 0.06
NDNQ99608 LINC00552-201ENST00000625151 2579 ntBASIC15.4■□□□□ 0.06
NDNQ99608 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDNQ99608 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NDNQ99608 REXO1L2P-201ENST00000425429 2069 ntBASIC15.4■□□□□ 0.06
NDNQ99608 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDNQ99608 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
NDNQ99608 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NDNQ99608 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.4■□□□□ 0.06
NDNQ99608 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDNQ99608 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NDNQ99608 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDNQ99608 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDNQ99608 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDNQ99608 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
NDNQ99608 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.4■□□□□ 0.06
NDNQ99608 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDNQ99608 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.4■□□□□ 0.06
NDNQ99608 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.4■□□□□ 0.06
NDNQ99608 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.39■□□□□ 0.05
NDNQ99608 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
NDNQ99608 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.39■□□□□ 0.05
NDNQ99608 FGD5P1-202ENST00000614866 2498 ntBASIC15.39■□□□□ 0.05
NDNQ99608 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.39■□□□□ 0.05
NDNQ99608 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.39■□□□□ 0.05
NDNQ99608 MYO15B-237ENST00000642007 4893 ntBASIC15.39■□□□□ 0.05
NDNQ99608 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.39■□□□□ 0.05
NDNQ99608 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.39■□□□□ 0.05
NDNQ99608 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
NDNQ99608 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.39■□□□□ 0.05
NDNQ99608 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NDNQ99608 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.39■□□□□ 0.05
NDNQ99608 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC15.39■□□□□ 0.05
NDNQ99608 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.39■□□□□ 0.05
NDNQ99608 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.39■□□□□ 0.05
NDNQ99608 KRT18P43-201ENST00000469825 1281 ntBASIC15.39■□□□□ 0.05
NDNQ99608 RAB35-202ENST00000534951 939 ntTSL 2 BASIC15.39■□□□□ 0.05
NDNQ99608 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.39■□□□□ 0.05
NDNQ99608 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.39■□□□□ 0.05
NDNQ99608 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.39■□□□□ 0.05
NDNQ99608 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.39■□□□□ 0.05
NDNQ99608 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.39■□□□□ 0.05
NDNQ99608 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
NDNQ99608 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
NDNQ99608 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
NDNQ99608 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC15.39■□□□□ 0.05
NDNQ99608 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.39■□□□□ 0.05
NDNQ99608 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.39■□□□□ 0.05
NDNQ99608 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
NDNQ99608 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NDNQ99608 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NDNQ99608 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NDNQ99608 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NDNQ99608 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
NDNQ99608 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NDNQ99608 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NDNQ99608 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NDNQ99608 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NDNQ99608 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
NDNQ99608 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NDNQ99608 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
NDNQ99608 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
NDNQ99608 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.38■□□□□ 0.05
NDNQ99608 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NDNQ99608 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NDNQ99608 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NDNQ99608 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms