Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
S1PR3Q99500 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC12.68□□□□□ -0.38
S1PR3Q99500 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
S1PR3Q99500 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
S1PR3Q99500 CICP11-201ENST00000434745 2827 ntBASIC12.67□□□□□ -0.38
S1PR3Q99500 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
S1PR3Q99500 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
S1PR3Q99500 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
S1PR3Q99500 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
S1PR3Q99500 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.67□□□□□ -0.38
S1PR3Q99500 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.67□□□□□ -0.38
S1PR3Q99500 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
S1PR3Q99500 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
S1PR3Q99500 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.67□□□□□ -0.38
S1PR3Q99500 RPL13P2-201ENST00000440687 659 ntBASIC12.67□□□□□ -0.38
S1PR3Q99500 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.67□□□□□ -0.38
S1PR3Q99500 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
S1PR3Q99500 AC093214.1-201ENST00000511688 1107 ntBASIC12.67□□□□□ -0.38
S1PR3Q99500 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.67□□□□□ -0.38
S1PR3Q99500 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.67□□□□□ -0.38
S1PR3Q99500 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
S1PR3Q99500 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC12.67□□□□□ -0.38
S1PR3Q99500 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.67□□□□□ -0.38
S1PR3Q99500 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
S1PR3Q99500 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
S1PR3Q99500 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC12.67□□□□□ -0.38
S1PR3Q99500 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
S1PR3Q99500 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
S1PR3Q99500 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
S1PR3Q99500 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
S1PR3Q99500 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
S1PR3Q99500 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
S1PR3Q99500 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
S1PR3Q99500 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
S1PR3Q99500 AC007292.2-201ENST00000593524 1812 ntBASIC12.67□□□□□ -0.38
S1PR3Q99500 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
S1PR3Q99500 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
S1PR3Q99500 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC12.67□□□□□ -0.38
S1PR3Q99500 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
S1PR3Q99500 PEG13-201ENST00000631594 5667 ntBASIC12.66□□□□□ -0.38
S1PR3Q99500 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
S1PR3Q99500 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.66□□□□□ -0.38
S1PR3Q99500 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.66□□□□□ -0.38
S1PR3Q99500 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.66□□□□□ -0.38
S1PR3Q99500 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
S1PR3Q99500 FGD5P1-202ENST00000614866 2498 ntBASIC12.66□□□□□ -0.38
S1PR3Q99500 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
S1PR3Q99500 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
S1PR3Q99500 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.66□□□□□ -0.38
S1PR3Q99500 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
S1PR3Q99500 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
S1PR3Q99500 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.66□□□□□ -0.38
S1PR3Q99500 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.66□□□□□ -0.38
S1PR3Q99500 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC12.66□□□□□ -0.38
S1PR3Q99500 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
S1PR3Q99500 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
S1PR3Q99500 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.66□□□□□ -0.38
S1PR3Q99500 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
S1PR3Q99500 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC12.66□□□□□ -0.38
S1PR3Q99500 GHSR-202ENST00000427970 912 ntBASIC12.66□□□□□ -0.38
S1PR3Q99500 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC12.66□□□□□ -0.38
S1PR3Q99500 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
S1PR3Q99500 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.66□□□□□ -0.38
S1PR3Q99500 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.66□□□□□ -0.38
S1PR3Q99500 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.66□□□□□ -0.38
S1PR3Q99500 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.66□□□□□ -0.38
S1PR3Q99500 AC005498.2-205ENST00000593218 784 ntBASIC12.66□□□□□ -0.38
S1PR3Q99500 AL390955.2-201ENST00000603032 514 ntBASIC12.66□□□□□ -0.38
S1PR3Q99500 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.66□□□□□ -0.38
S1PR3Q99500 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
S1PR3Q99500 AF228730.6-201ENST00000641497 218 ntBASIC12.66□□□□□ -0.38
S1PR3Q99500 AL645728.2-202ENST00000641679 227 ntBASIC12.66□□□□□ -0.38
S1PR3Q99500 AC084121.3-201ENST00000641716 218 ntBASIC12.66□□□□□ -0.38
S1PR3Q99500 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
S1PR3Q99500 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.66□□□□□ -0.38
S1PR3Q99500 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms