Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 AL513480.1-201ENST00000451731 511 ntBASIC11.65□□□□□ -0.54
AP1S3Q96PC3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 AC105339.3-201ENST00000560043 636 ntBASIC11.65□□□□□ -0.54
AP1S3Q96PC3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 MIR4751-201ENST00000578027 74 ntBASIC11.65□□□□□ -0.54
AP1S3Q96PC3 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 GALNT6-202ENST00000543196 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 AC135012.1-201ENST00000563931 7430 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
AP1S3Q96PC3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
AP1S3Q96PC3 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.55
AP1S3Q96PC3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
AP1S3Q96PC3 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
AP1S3Q96PC3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.55
AP1S3Q96PC3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
AP1S3Q96PC3 REXO1L1P-202ENST00000608646 1974 ntBASIC11.65□□□□□ -0.55
AP1S3Q96PC3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC11.65□□□□□ -0.55
AP1S3Q96PC3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
AP1S3Q96PC3 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
AP1S3Q96PC3 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 AC092127.1-201ENST00000567093 3455 ntBASIC11.64□□□□□ -0.55
AP1S3Q96PC3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 RNF115-202ENST00000582693 9117 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 TSPY19P-201ENST00000418461 509 ntBASIC11.64□□□□□ -0.55
AP1S3Q96PC3 TSPY18P-201ENST00000441642 509 ntBASIC11.64□□□□□ -0.55
AP1S3Q96PC3 HCG4P8-203ENST00000443049 980 ntBASIC11.64□□□□□ -0.55
AP1S3Q96PC3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 AC109635.5-201ENST00000533593 962 ntBASIC11.64□□□□□ -0.55
AP1S3Q96PC3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 ILF3-AS1-201ENST00000591501 1983 ntBASIC11.64□□□□□ -0.55
AP1S3Q96PC3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 HAUS6-202ENST00000380502 6536 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 RGS6-203ENST00000402788 5400 ntTSL 2 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
AP1S3Q96PC3 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 C18orf15-201ENST00000623680 2534 ntBASIC11.63□□□□□ -0.55
AP1S3Q96PC3 PMS2P7-201ENST00000506558 1336 ntBASIC11.63□□□□□ -0.55
AP1S3Q96PC3 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 AC134407.2-201ENST00000625089 1978 ntBASIC11.63□□□□□ -0.55
AP1S3Q96PC3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
AP1S3Q96PC3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms