Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 YBX2P1-201ENST00000394192 760 ntBASIC13.62□□□□□ -0.23
RFT1Q96AA3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFT1Q96AA3 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFT1Q96AA3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 AL450472.2-201ENST00000603663 1156 ntBASIC13.62□□□□□ -0.23
RFT1Q96AA3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFT1Q96AA3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFT1Q96AA3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFT1Q96AA3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFT1Q96AA3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC13.62□□□□□ -0.23
RFT1Q96AA3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
RFT1Q96AA3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RFT1Q96AA3 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 CICP17-201ENST00000418553 2377 ntBASIC13.61□□□□□ -0.23
RFT1Q96AA3 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 CICP20-201ENST00000443330 2801 ntBASIC13.61□□□□□ -0.23
RFT1Q96AA3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 POLD2P1-201ENST00000511220 997 ntBASIC13.61□□□□□ -0.23
RFT1Q96AA3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
RFT1Q96AA3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
RFT1Q96AA3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
RFT1Q96AA3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RFT1Q96AA3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms