Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
AP3S1Q92572 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.51□□□□□ -0.25
AP3S1Q92572 COL6A4P2-202ENST00000504443 2753 ntBASIC13.51□□□□□ -0.25
AP3S1Q92572 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.51□□□□□ -0.25
AP3S1Q92572 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
AP3S1Q92572 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
AP3S1Q92572 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
AP3S1Q92572 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 AC015818.8-201ENST00000587907 1519 ntBASIC13.5□□□□□ -0.25
AP3S1Q92572 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
AP3S1Q92572 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
AP3S1Q92572 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
AP3S1Q92572 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
AP3S1Q92572 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.5□□□□□ -0.25
AP3S1Q92572 GUK1-204ENST00000366721 689 ntTSL 3 BASIC13.5□□□□□ -0.25
AP3S1Q92572 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
AP3S1Q92572 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
AP3S1Q92572 AC136604.1-201ENST00000418535 575 ntBASIC13.5□□□□□ -0.25
AP3S1Q92572 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
AP3S1Q92572 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
AP3S1Q92572 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.5□□□□□ -0.25
AP3S1Q92572 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.5□□□□□ -0.25
AP3S1Q92572 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.5□□□□□ -0.25
AP3S1Q92572 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
AP3S1Q92572 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 AC005593.1-201ENST00000624894 515 ntBASIC13.5□□□□□ -0.25
AP3S1Q92572 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.5□□□□□ -0.25
AP3S1Q92572 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
AP3S1Q92572 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.5□□□□□ -0.25
AP3S1Q92572 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
AP3S1Q92572 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
AP3S1Q92572 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 AL591122.2-201ENST00000624125 1853 ntBASIC13.5□□□□□ -0.25
AP3S1Q92572 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.5□□□□□ -0.25
AP3S1Q92572 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
AP3S1Q92572 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
AP3S1Q92572 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
AP3S1Q92572 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.49□□□□□ -0.25
AP3S1Q92572 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.49□□□□□ -0.25
AP3S1Q92572 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.49□□□□□ -0.25
AP3S1Q92572 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.49□□□□□ -0.25
AP3S1Q92572 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.49□□□□□ -0.25
AP3S1Q92572 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
AP3S1Q92572 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 MIR193BHG-211ENST00000641433 5365 ntBASIC13.49□□□□□ -0.25
AP3S1Q92572 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
AP3S1Q92572 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms