Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 HIST3H2BA-201ENST00000436555 524 ntBASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 TARDBPP1-201ENST00000442013 1203 ntBASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 AL049840.3-201ENST00000602669 611 ntBASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 AL356585.2-201ENST00000625078 2396 ntBASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 INE2-201ENST00000630399 1874 ntBASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 AC090505.1-201ENST00000430515 1834 ntBASIC15.2■□□□□ 0.02
CKAP2Q8WWK9 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 MIR346-201ENST00000362234 95 ntBASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 RNA5SP415-201ENST00000517246 115 ntBASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 AC018845.2-201ENST00000568326 409 ntBASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 MIR7706-201ENST00000613747 67 ntBASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CKAP2Q8WWK9 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CKAP2Q8WWK9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms