Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC18.22■□□□□ 0.51
SNED1Q8TER0 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SNED1Q8TER0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.22■□□□□ 0.51
SNED1Q8TER0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNED1Q8TER0 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SNED1Q8TER0 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNED1Q8TER0 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SNED1Q8TER0 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNED1Q8TER0 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNED1Q8TER0 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNED1Q8TER0 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.21■□□□□ 0.51
SNED1Q8TER0 AP003680.1-201ENST00000598970 3660 ntBASIC18.21■□□□□ 0.51
SNED1Q8TER0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNED1Q8TER0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNED1Q8TER0 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNED1Q8TER0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
SNED1Q8TER0 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
SNED1Q8TER0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SNED1Q8TER0 AC105250.1-201ENST00000509378 2057 ntBASIC18.21■□□□□ 0.51
SNED1Q8TER0 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNED1Q8TER0 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC18.21■□□□□ 0.51
SNED1Q8TER0 AL031713.1-201ENST00000564813 661 ntBASIC18.21■□□□□ 0.51
SNED1Q8TER0 DDX5-235ENST00000630471 473 ntTSL 4 BASIC18.21■□□□□ 0.51
SNED1Q8TER0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SNED1Q8TER0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNED1Q8TER0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNED1Q8TER0 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
SNED1Q8TER0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SNED1Q8TER0 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.5
SNED1Q8TER0 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SNED1Q8TER0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNED1Q8TER0 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNED1Q8TER0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNED1Q8TER0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.2■□□□□ 0.5
SNED1Q8TER0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC18.2■□□□□ 0.5
SNED1Q8TER0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.2■□□□□ 0.5
SNED1Q8TER0 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNED1Q8TER0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNED1Q8TER0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.2■□□□□ 0.5
SNED1Q8TER0 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNED1Q8TER0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNED1Q8TER0 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.2■□□□□ 0.5
SNED1Q8TER0 CICP11-201ENST00000434745 2827 ntBASIC18.2■□□□□ 0.5
SNED1Q8TER0 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
SNED1Q8TER0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNED1Q8TER0 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
SNED1Q8TER0 CICP12-201ENST00000455801 843 ntBASIC18.2■□□□□ 0.5
SNED1Q8TER0 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC18.2■□□□□ 0.5
SNED1Q8TER0 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC18.2■□□□□ 0.5
SNED1Q8TER0 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC18.2■□□□□ 0.5
SNED1Q8TER0 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC18.2■□□□□ 0.5
SNED1Q8TER0 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNED1Q8TER0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.2■□□□□ 0.5
SNED1Q8TER0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNED1Q8TER0 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNED1Q8TER0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SNED1Q8TER0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.2■□□□□ 0.5
SNED1Q8TER0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC18.2■□□□□ 0.5
SNED1Q8TER0 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNED1Q8TER0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNED1Q8TER0 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
SNED1Q8TER0 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SNED1Q8TER0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.19■□□□□ 0.5
SNED1Q8TER0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNED1Q8TER0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNED1Q8TER0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SNED1Q8TER0 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SNED1Q8TER0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.19■□□□□ 0.5
SNED1Q8TER0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
SNED1Q8TER0 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.19■□□□□ 0.5
SNED1Q8TER0 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SNED1Q8TER0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNED1Q8TER0 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SNED1Q8TER0 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNED1Q8TER0 AL512430.1-201ENST00000392575 860 ntBASIC18.19■□□□□ 0.5
SNED1Q8TER0 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SNED1Q8TER0 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC18.19■□□□□ 0.5
SNED1Q8TER0 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
SNED1Q8TER0 AC025262.2-201ENST00000623975 1056 ntBASIC18.19■□□□□ 0.5
SNED1Q8TER0 AC127024.7-201ENST00000625101 200 ntBASIC18.19■□□□□ 0.5
SNED1Q8TER0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNED1Q8TER0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNED1Q8TER0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC18.19■□□□□ 0.5
SNED1Q8TER0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNED1Q8TER0 AL359258.3-201ENST00000622910 2331 ntBASIC18.19■□□□□ 0.5
SNED1Q8TER0 AC092850.2-201ENST00000623821 2697 ntBASIC18.19■□□□□ 0.5
SNED1Q8TER0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNED1Q8TER0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.19■□□□□ 0.5
SNED1Q8TER0 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC18.19■□□□□ 0.5
SNED1Q8TER0 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.19■□□□□ 0.5
SNED1Q8TER0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNED1Q8TER0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNED1Q8TER0 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SNED1Q8TER0 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNED1Q8TER0 AC144522.1-201ENST00000625111 1658 ntBASIC18.18■□□□□ 0.5
SNED1Q8TER0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SNED1Q8TER0 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNED1Q8TER0 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNED1Q8TER0 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
SNED1Q8TER0 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms