Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 AC083801.1-201ENST00000491689 358 ntBASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 KRT18P37-201ENST00000520711 1282 ntBASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 KRT8P28-201ENST00000433288 1390 ntBASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 AC023141.7-201ENST00000430646 407 ntBASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 AC092580.1-201ENST00000433998 658 ntBASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 GDNF-207ENST00000515058 764 ntTSL 5 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 CYP4F36P-201ENST00000589193 186 ntBASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 AL160191.2-201ENST00000603975 601 ntBASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 LILRP1-201ENST00000444199 1370 ntBASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 CALCA-205ENST00000486207 851 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 AL118522.1-201ENST00000611368 560 ntBASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
ALMS1Q8TCU4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 SNX15-201ENST00000352068 771 ntTSL 5 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 AC011462.4-201ENST00000616866 449 ntBASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 AC013726.1-201ENST00000563747 2285 ntBASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 BAK1P1-201ENST00000317045 636 ntBASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 PTGER4P2-201ENST00000328411 252 ntBASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 FDPSP7-201ENST00000429043 1054 ntBASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 PTGER4P3-201ENST00000458150 252 ntBASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 AC010632.2-201ENST00000588369 1224 ntBASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 MIR6816-201ENST00000620368 66 ntBASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
ALMS1Q8TCU4 NME4-203ENST00000397722 1232 ntTSL 2 BASIC9.93□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms