Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
DNAAF1Q8NEP3 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
DNAAF1Q8NEP3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
DNAAF1Q8NEP3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
DNAAF1Q8NEP3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
DNAAF1Q8NEP3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
DNAAF1Q8NEP3 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
DNAAF1Q8NEP3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.52□□□□□ -0.24
DNAAF1Q8NEP3 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
DNAAF1Q8NEP3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
DNAAF1Q8NEP3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
DNAAF1Q8NEP3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
DNAAF1Q8NEP3 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
DNAAF1Q8NEP3 AC126335.2-201ENST00000623362 4637 ntBASIC13.52□□□□□ -0.24
DNAAF1Q8NEP3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
DNAAF1Q8NEP3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
DNAAF1Q8NEP3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.52□□□□□ -0.24
DNAAF1Q8NEP3 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
DNAAF1Q8NEP3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 RPL5P21-201ENST00000404620 815 ntBASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 KRT18P32-201ENST00000424695 1287 ntBASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 AC105021.1-202ENST00000570572 669 ntBASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 BX640514.1-201ENST00000583223 1918 ntBASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 REXO1L2P-201ENST00000425429 2069 ntBASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 AP000845.1-201ENST00000581677 2131 ntBASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
DNAAF1Q8NEP3 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 C1R-201ENST00000535233 2211 ntTSL 2 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 AL035456.1-201ENST00000456064 1369 ntBASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
DNAAF1Q8NEP3 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms