Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 GHSR-202ENST00000427970 912 ntBASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 AC009407.1-201ENST00000568958 598 ntBASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 AC004461.2-201ENST00000629517 803 ntBASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
ZNF439Q8NDP4 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 BTBD7P1-201ENST00000447253 1453 ntBASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 PEG13-201ENST00000631594 5667 ntBASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 CICP11-201ENST00000434745 2827 ntBASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 AC055876.3-201ENST00000431496 288 ntBASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 IGHV3-42-201ENST00000520410 361 ntBASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 AC000095.1-201ENST00000603208 874 ntBASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 AC138649.4-201ENST00000612222 287 ntBASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 AL645728.2-202ENST00000641679 227 ntBASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
ZNF439Q8NDP4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.71□□□□□ -0.37
ZNF439Q8NDP4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms