Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC116Q8IYX3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC116Q8IYX3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC116Q8IYX3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC116Q8IYX3 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CCDC116Q8IYX3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.46□□□□□ -0.1
CCDC116Q8IYX3 SLC7A15P-201ENST00000424028 1363 ntBASIC14.46□□□□□ -0.1
CCDC116Q8IYX3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC116Q8IYX3 AC007686.3-201ENST00000619017 3487 ntBASIC14.46□□□□□ -0.1
CCDC116Q8IYX3 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC116Q8IYX3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC116Q8IYX3 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC116Q8IYX3 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.46□□□□□ -0.1
CCDC116Q8IYX3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC116Q8IYX3 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CCDC116Q8IYX3 AJ011931.1-201ENST00000618749 2492 ntBASIC14.46□□□□□ -0.1
CCDC116Q8IYX3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 OR2I1P-210ENST00000642037 4691 ntBASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 AC104457.1-201ENST00000401024 814 ntBASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 BCRP1-201ENST00000444246 691 ntBASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 VDAC1P7-201ENST00000462417 847 ntBASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 AC004066.1-201ENST00000502488 802 ntBASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 GAPDHP40-201ENST00000505218 1006 ntBASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 AC104596.2-201ENST00000512793 793 ntBASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 AC055876.2-201ENST00000531834 546 ntBASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 SPCS2P1-201ENST00000561636 679 ntBASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 RRP7BP-205ENST00000566851 833 ntBASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 LINC02560-201ENST00000596379 459 ntBASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 AC004233.3-201ENST00000607794 1269 ntBASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 AL662799.1-202ENST00000614205 422 ntBASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 ACE3P-201ENST00000423435 1973 ntBASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 OR2I1P-209ENST00000641730 5365 ntBASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
CCDC116Q8IYX3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CCDC116Q8IYX3 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms