Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LINC00346Q8IVM7 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 ZBTB45P1-201ENST00000452761 1456 ntBASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 AC012508.2-201ENST00000567613 1472 ntBASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 FAM8A3P-201ENST00000427218 844 ntBASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 AC114501.2-201ENST00000439631 535 ntBASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 ZNF890P-202ENST00000530367 1156 ntBASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 AC009407.1-201ENST00000568958 598 ntBASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 AC106028.4-201ENST00000614509 607 ntBASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 AC093512.1-201ENST00000617969 520 ntBASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 AL158212.4-201ENST00000624062 1286 ntBASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 AL390755.1-201ENST00000623716 2027 ntBASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 AC232323.1-201ENST00000540724 2099 ntBASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 REXO1L5P-201ENST00000622260 2098 ntBASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 FAM45BP-202ENST00000592932 1624 ntBASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
LINC00346Q8IVM7 ST20-AS1-201ENST00000560255 4223 ntBASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
LINC00346Q8IVM7 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms