Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB11FIP4Q86YS3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RAB11FIP4Q86YS3 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RAB11FIP4Q86YS3 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RAB11FIP4Q86YS3 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 RNU1-114P-201ENST00000365297 166 ntBASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 SOCS2P1-201ENST00000417727 557 ntBASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 TMEM14DP-201ENST00000422205 345 ntBASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 AC093525.8-201ENST00000624099 1342 ntBASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 ZBED1P1-201ENST00000502364 1930 ntBASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RAB11FIP4Q86YS3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 AC104457.1-201ENST00000401024 814 ntBASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 INE1-201ENST00000456273 945 ntBASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 RPL13AP25-201ENST00000484130 612 ntBASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 AC004066.1-201ENST00000502488 802 ntBASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 AL596325.1-201ENST00000563991 1082 ntBASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 AC132938.2-201ENST00000579188 680 ntBASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 AL591163.1-201ENST00000641757 987 ntBASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 AC105233.6-201ENST00000642093 218 ntBASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RAB11FIP4Q86YS3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RAB11FIP4Q86YS3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms