Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 AC006033.1-201ENST00000440505 426 ntBASIC16.98■□□□□ 0.31
TRIM50Q86XT4 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM50Q86XT4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 AC015818.8-201ENST00000587907 1519 ntBASIC16.97■□□□□ 0.31
TRIM50Q86XT4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 NME6-203ENST00000415644 849 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 FAM8A4P-201ENST00000435433 1213 ntBASIC16.97■□□□□ 0.31
TRIM50Q86XT4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 COX5BP1-201ENST00000507622 393 ntBASIC16.97■□□□□ 0.31
TRIM50Q86XT4 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 AL606495.2-201ENST00000605867 535 ntBASIC16.97■□□□□ 0.31
TRIM50Q86XT4 AL008638.5-201ENST00000623814 1298 ntBASIC16.97■□□□□ 0.31
TRIM50Q86XT4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM50Q86XT4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 AC018735.1-201ENST00000437208 1502 ntBASIC16.96■□□□□ 0.31
TRIM50Q86XT4 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 REXO1L4P-201ENST00000605109 1937 ntBASIC16.96■□□□□ 0.31
TRIM50Q86XT4 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 AL391280.1-201ENST00000506969 1062 ntBASIC16.96■□□□□ 0.31
TRIM50Q86XT4 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.96■□□□□ 0.31
TRIM50Q86XT4 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms