Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 AC023090.2-201ENST00000625182 2110 ntBASIC18.84■□□□□ 0.61
CHD1LQ86WJ1 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CHD1LQ86WJ1 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHD1LQ86WJ1 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHD1LQ86WJ1 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHD1LQ86WJ1 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHD1LQ86WJ1 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHD1LQ86WJ1 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CHD1LQ86WJ1 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHD1LQ86WJ1 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
CHD1LQ86WJ1 AP001267.2-201ENST00000532619 2086 ntBASIC18.83■□□□□ 0.61
CHD1LQ86WJ1 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHD1LQ86WJ1 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.83■□□□□ 0.61
CHD1LQ86WJ1 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CHD1LQ86WJ1 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC18.83■□□□□ 0.61
CHD1LQ86WJ1 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHD1LQ86WJ1 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHD1LQ86WJ1 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 CYMP-203ENST00000474680 1263 ntBASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 FADS2-205ENST00000517839 469 ntTSL 3 BASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 INTS4P1-203ENST00000641008 3683 ntBASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD1LQ86WJ1 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 OSM-203ENST00000403463 464 ntTSL 3 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 SPTLC1P1-201ENST00000447199 261 ntBASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 AC099568.2-201ENST00000609194 695 ntBASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 PRSS30P-206ENST00000641773 873 ntBASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC18.82■□□□□ 0.6
CHD1LQ86WJ1 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 SLC7A15P-201ENST00000424028 1363 ntBASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 RPL13AP25-201ENST00000484130 612 ntBASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 AC093004.1-201ENST00000508850 424 ntBASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CHD1LQ86WJ1 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms