Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 LINC01144-201ENST00000626198 1710 ntBASIC10.22□□□□□ -0.77
SCXQ7RTU7 AC005622.1-201ENST00000636801 1703 ntBASIC10.22□□□□□ -0.77
SCXQ7RTU7 AL031595.1-201ENST00000623969 4709 ntBASIC10.22□□□□□ -0.77
SCXQ7RTU7 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 AC098614.1-201ENST00000368528 745 ntBASIC10.22□□□□□ -0.77
SCXQ7RTU7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 SPDYE17-201ENST00000412399 783 ntBASIC10.22□□□□□ -0.77
SCXQ7RTU7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 AP006294.1-201ENST00000415407 339 ntBASIC10.22□□□□□ -0.77
SCXQ7RTU7 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 AC114501.2-201ENST00000439631 535 ntBASIC10.22□□□□□ -0.77
SCXQ7RTU7 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 AC008494.3-201ENST00000606615 944 ntBASIC10.22□□□□□ -0.77
SCXQ7RTU7 TEX48-202ENST00000612244 662 ntTSL 3 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 AC004790.1-201ENST00000612686 536 ntBASIC10.22□□□□□ -0.77
SCXQ7RTU7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC10.22□□□□□ -0.77
SCXQ7RTU7 AC007431.3-201ENST00000623221 587 ntBASIC10.22□□□□□ -0.77
SCXQ7RTU7 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
SCXQ7RTU7 GGT3P-204ENST00000453783 1664 ntBASIC10.22□□□□□ -0.77
SCXQ7RTU7 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC10.22□□□□□ -0.77
SCXQ7RTU7 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SCXQ7RTU7 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SCXQ7RTU7 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SCXQ7RTU7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SCXQ7RTU7 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
SCXQ7RTU7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
SCXQ7RTU7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
SCXQ7RTU7 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
SCXQ7RTU7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC10.21□□□□□ -0.77
SCXQ7RTU7 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
SCXQ7RTU7 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC10.21□□□□□ -0.77
SCXQ7RTU7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SCXQ7RTU7 AC107918.4-201ENST00000641966 3141 ntBASIC10.21□□□□□ -0.77
SCXQ7RTU7 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
SCXQ7RTU7 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC10.21□□□□□ -0.77
SCXQ7RTU7 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SCXQ7RTU7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
SCXQ7RTU7 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
SCXQ7RTU7 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SCXQ7RTU7 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SCXQ7RTU7 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SCXQ7RTU7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SCXQ7RTU7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
SCXQ7RTU7 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
SCXQ7RTU7 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC10.21□□□□□ -0.77
SCXQ7RTU7 SDHAP3-202ENST00000515467 728 ntBASIC10.21□□□□□ -0.77
SCXQ7RTU7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC10.21□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms