Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
SMARCD3Q6STE5 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 AP001059.3-201ENST00000619053 235 ntBASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
SMARCD3Q6STE5 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 AC138969.2-201ENST00000532739 9932 ntBASIC14□□□□□ -0.17
SMARCD3Q6STE5 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 AL080243.2-201ENST00000418783 582 ntBASIC14□□□□□ -0.17
SMARCD3Q6STE5 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 AL033527.5-202ENST00000641632 1098 ntBASIC14□□□□□ -0.17
SMARCD3Q6STE5 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
SMARCD3Q6STE5 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14□□□□□ -0.17
SMARCD3Q6STE5 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms