Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 AP001160.2-201ENST00000596071 487 ntBASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 AC003101.2-201ENST00000612557 442 ntBASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 AC018529.1-201ENST00000613063 361 ntBASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
TMEM53Q6P2H8 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 TSEN15P1-201ENST00000423257 515 ntBASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 AC243562.2-201ENST00000561247 970 ntBASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 AC004449.1-201ENST00000564240 433 ntBASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 AC026150.2-201ENST00000564693 1156 ntBASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 GPALPP1-207ENST00000611650 899 ntBASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 MIR6080-201ENST00000617359 66 ntBASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 AP001059.3-201ENST00000619053 235 ntBASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 LINC00628-201ENST00000628516 1289 ntBASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.13□□□□□ -0.15
TMEM53Q6P2H8 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 AP001282.1-201ENST00000531301 1499 ntBASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
TMEM53Q6P2H8 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms