Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 RNA5SP410-201ENST00000516285 106 ntBASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 KRT8P23-201ENST00000560090 1207 ntBASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 AC093520.2-201ENST00000561830 333 ntBASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 AC025678.2-201ENST00000562061 970 ntBASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 AP000842.3-202ENST00000569238 1080 ntBASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 AC009093.7-201ENST00000623853 1223 ntBASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 AC079781.5-202ENST00000641784 3743 ntBASIC14.74□□□□□ -0.05
PPP4R4Q6NUP7 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 WASH3P-207ENST00000560956 1394 ntBASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 FO538757.1-201ENST00000623083 1397 ntBASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 MBLAC2-202ENST00000514906 1936 ntBASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 AC109322.1-201ENST00000524499 1264 ntBASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PPP4R4Q6NUP7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 AL139400.1-201ENST00000366220 510 ntBASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PPP4R4Q6NUP7 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms