Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF43Q68DV7 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF43Q68DV7 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RNF43Q68DV7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF43Q68DV7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF43Q68DV7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF43Q68DV7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF43Q68DV7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF43Q68DV7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF43Q68DV7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF43Q68DV7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF43Q68DV7 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF43Q68DV7 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF43Q68DV7 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF43Q68DV7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF43Q68DV7 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 AL033527.5-201ENST00000641382 801 ntBASIC16.06■□□□□ 0.16
RNF43Q68DV7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF43Q68DV7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF43Q68DV7 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF43Q68DV7 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF43Q68DV7 AC005912.2-201ENST00000619492 2400 ntBASIC16.06■□□□□ 0.16
RNF43Q68DV7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF43Q68DV7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF43Q68DV7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF43Q68DV7 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
RNF43Q68DV7 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
RNF43Q68DV7 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
RNF43Q68DV7 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF43Q68DV7 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF43Q68DV7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF43Q68DV7 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF43Q68DV7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
RNF43Q68DV7 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF43Q68DV7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF43Q68DV7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF43Q68DV7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
RNF43Q68DV7 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RNF43Q68DV7 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF43Q68DV7 HLA-DPB2-205ENST00000435074 1188 ntBASIC16.05■□□□□ 0.16
RNF43Q68DV7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF43Q68DV7 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF43Q68DV7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF43Q68DV7 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.05■□□□□ 0.16
RNF43Q68DV7 AC026410.3-201ENST00000514280 936 ntBASIC16.05■□□□□ 0.16
RNF43Q68DV7 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
RNF43Q68DV7 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.05■□□□□ 0.16
RNF43Q68DV7 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF43Q68DV7 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.05■□□□□ 0.16
RNF43Q68DV7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF43Q68DV7 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF43Q68DV7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RNF43Q68DV7 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF43Q68DV7 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF43Q68DV7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF43Q68DV7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
RNF43Q68DV7 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF43Q68DV7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF43Q68DV7 PKD1P5-201ENST00000532415 10291 ntBASIC16.05■□□□□ 0.16
RNF43Q68DV7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.05■□□□□ 0.16
RNF43Q68DV7 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF43Q68DV7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
RNF43Q68DV7 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF43Q68DV7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF43Q68DV7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.05■□□□□ 0.16
RNF43Q68DV7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
RNF43Q68DV7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF43Q68DV7 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
RNF43Q68DV7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RNF43Q68DV7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RNF43Q68DV7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF43Q68DV7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF43Q68DV7 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RNF43Q68DV7 INTS4P2-202ENST00000614726 2019 ntBASIC16.04■□□□□ 0.16
RNF43Q68DV7 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF43Q68DV7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RNF43Q68DV7 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RNF43Q68DV7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RNF43Q68DV7 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms