Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.49■□□□□ 0.23
TRIM71Q2Q1W2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 AL138725.1-201ENST00000407347 1314 ntBASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 VDAC1P1-201ENST00000439229 848 ntBASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 KLF2P1-201ENST00000447438 1042 ntBASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 AC103988.2-201ENST00000561804 725 ntBASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TRIM71Q2Q1W2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 AP005117.1-202ENST00000581724 1908 ntBASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 UFM1-202ENST00000379649 846 ntTSL 4 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 AL596276.2-201ENST00000447525 331 ntBASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 EEF1DP6-201ENST00000449232 372 ntBASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 HLA-J-204ENST00000495278 958 ntBASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 AL132994.2-201ENST00000603120 687 ntBASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 AL353770.1-201ENST00000614915 403 ntBASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRIM71Q2Q1W2 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM71Q2Q1W2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM71Q2Q1W2 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
TRIM71Q2Q1W2 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.46■□□□□ 0.23
TRIM71Q2Q1W2 AL157791.1-201ENST00000553667 1699 ntBASIC16.46■□□□□ 0.23
TRIM71Q2Q1W2 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM71Q2Q1W2 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM71Q2Q1W2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM71Q2Q1W2 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRIM71Q2Q1W2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms