Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 AL158070.2-201ENST00000623713 1621 ntBASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 AC092638.2-201ENST00000441105 947 ntBASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 TMCO5B-205ENST00000530020 894 ntBASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 POLD4-208ENST00000532830 904 ntTSL 3 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 DUX4L46-201ENST00000566845 751 ntBASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 MIR4522-201ENST00000584932 87 ntBASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 AC138466.5-201ENST00000624002 808 ntBASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 E2F3P2-201ENST00000447755 1422 ntBASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.64□□□□□ -0.07
RSPO4Q2I0M5 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 AC004066.1-201ENST00000502488 802 ntBASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 MIR3180-2-201ENST00000581748 88 ntBASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 LINC01783-202ENST00000614408 828 ntBASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 BX284668.2-205ENST00000619677 828 ntBASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 AC002472.4-201ENST00000641915 272 ntBASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
RSPO4Q2I0M5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms