Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SCN1BQ07699 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SCN1BQ07699 NARF-206ENST00000457415 1668 ntTSL 5 BASIC13.71□□□□□ -0.21
SCN1BQ07699 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SCN1BQ07699 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SCN1BQ07699 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.71□□□□□ -0.21
SCN1BQ07699 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SCN1BQ07699 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SCN1BQ07699 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.71□□□□□ -0.21
SCN1BQ07699 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SCN1BQ07699 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
SCN1BQ07699 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.71□□□□□ -0.22
SCN1BQ07699 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.71□□□□□ -0.22
SCN1BQ07699 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SCN1BQ07699 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
SCN1BQ07699 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
SCN1BQ07699 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
SCN1BQ07699 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SCN1BQ07699 PPT1-213ENST00000641319 2388 ntBASIC13.71□□□□□ -0.22
SCN1BQ07699 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.71□□□□□ -0.22
SCN1BQ07699 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SCN1BQ07699 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SCN1BQ07699 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
SCN1BQ07699 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SCN1BQ07699 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.7□□□□□ -0.22
SCN1BQ07699 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SCN1BQ07699 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SCN1BQ07699 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
SCN1BQ07699 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.7□□□□□ -0.22
SCN1BQ07699 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.7□□□□□ -0.22
SCN1BQ07699 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.7□□□□□ -0.22
SCN1BQ07699 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SCN1BQ07699 AC002056.1-201ENST00000395613 760 ntBASIC13.7□□□□□ -0.22
SCN1BQ07699 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 FDX1P1-201ENST00000449115 551 ntBASIC13.7□□□□□ -0.22
SCN1BQ07699 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.7□□□□□ -0.22
SCN1BQ07699 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
SCN1BQ07699 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.7□□□□□ -0.22
SCN1BQ07699 AC112191.1-201ENST00000523689 701 ntBASIC13.7□□□□□ -0.22
SCN1BQ07699 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.7□□□□□ -0.22
SCN1BQ07699 PDPK2P-202ENST00000562415 1191 ntBASIC13.7□□□□□ -0.22
SCN1BQ07699 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.7□□□□□ -0.22
SCN1BQ07699 AC140113.2-201ENST00000604370 208 ntBASIC13.7□□□□□ -0.22
SCN1BQ07699 AC027601.4-201ENST00000611259 610 ntBASIC13.7□□□□□ -0.22
SCN1BQ07699 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SCN1BQ07699 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.7□□□□□ -0.22
SCN1BQ07699 AC092865.6-201ENST00000642101 219 ntBASIC13.7□□□□□ -0.22
SCN1BQ07699 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.7□□□□□ -0.22
SCN1BQ07699 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.7□□□□□ -0.22
SCN1BQ07699 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
SCN1BQ07699 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SCN1BQ07699 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SCN1BQ07699 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SCN1BQ07699 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.7□□□□□ -0.22
SCN1BQ07699 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.7□□□□□ -0.22
SCN1BQ07699 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.7□□□□□ -0.22
SCN1BQ07699 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SCN1BQ07699 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SCN1BQ07699 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SCN1BQ07699 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.69□□□□□ -0.22
SCN1BQ07699 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SCN1BQ07699 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.69□□□□□ -0.22
SCN1BQ07699 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.69□□□□□ -0.22
SCN1BQ07699 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SCN1BQ07699 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SCN1BQ07699 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SCN1BQ07699 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.69□□□□□ -0.22
SCN1BQ07699 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SCN1BQ07699 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.69□□□□□ -0.22
SCN1BQ07699 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SCN1BQ07699 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SCN1BQ07699 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms