Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.92□□□□□ -0.18
CACNA1BQ00975 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CACNA1BQ00975 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CACNA1BQ00975 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CACNA1BQ00975 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CACNA1BQ00975 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CACNA1BQ00975 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CACNA1BQ00975 KRT8P14-201ENST00000414254 1442 ntBASIC13.92□□□□□ -0.18
CACNA1BQ00975 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CACNA1BQ00975 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.92□□□□□ -0.18
CACNA1BQ00975 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.92□□□□□ -0.18
CACNA1BQ00975 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CACNA1BQ00975 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CACNA1BQ00975 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.92□□□□□ -0.18
CACNA1BQ00975 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CACNA1BQ00975 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC13.92□□□□□ -0.18
CACNA1BQ00975 AC115618.3-201ENST00000623114 425 ntBASIC13.92□□□□□ -0.18
CACNA1BQ00975 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC13.92□□□□□ -0.18
CACNA1BQ00975 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
CACNA1BQ00975 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CACNA1BQ00975 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CACNA1BQ00975 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CACNA1BQ00975 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CACNA1BQ00975 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CACNA1BQ00975 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CACNA1BQ00975 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CACNA1BQ00975 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CACNA1BQ00975 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CACNA1BQ00975 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CACNA1BQ00975 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC13.91□□□□□ -0.18
CACNA1BQ00975 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CACNA1BQ00975 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CACNA1BQ00975 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CACNA1BQ00975 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.91□□□□□ -0.18
CACNA1BQ00975 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CACNA1BQ00975 AC018892.3-201ENST00000623986 2499 ntBASIC13.91□□□□□ -0.18
CACNA1BQ00975 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CACNA1BQ00975 CFAP20-201ENST00000262498 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CACNA1BQ00975 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.91□□□□□ -0.18
CACNA1BQ00975 AC006328.1-201ENST00000437571 379 ntBASIC13.91□□□□□ -0.18
CACNA1BQ00975 SOD2-205ENST00000444946 917 ntTSL 2 BASIC13.91□□□□□ -0.18
CACNA1BQ00975 AC008440.1-201ENST00000455835 439 ntTSL 5 BASIC13.91□□□□□ -0.18
CACNA1BQ00975 AL110503.1-201ENST00000457224 534 ntTSL 3 BASIC13.91□□□□□ -0.18
CACNA1BQ00975 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC13.91□□□□□ -0.18
CACNA1BQ00975 AC092862.1-201ENST00000541534 533 ntBASIC13.91□□□□□ -0.18
CACNA1BQ00975 DUX4L46-201ENST00000566845 751 ntBASIC13.91□□□□□ -0.18
CACNA1BQ00975 ARL17B-207ENST00000575960 731 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
CACNA1BQ00975 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC13.91□□□□□ -0.18
CACNA1BQ00975 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CACNA1BQ00975 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CACNA1BQ00975 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CACNA1BQ00975 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CACNA1BQ00975 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.91□□□□□ -0.18
CACNA1BQ00975 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
CACNA1BQ00975 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CACNA1BQ00975 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CACNA1BQ00975 VENTXP4-201ENST00000449029 958 ntBASIC13.91□□□□□ -0.18
CACNA1BQ00975 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CACNA1BQ00975 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.91□□□□□ -0.18
CACNA1BQ00975 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.91□□□□□ -0.18
CACNA1BQ00975 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.91□□□□□ -0.18
CACNA1BQ00975 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC13.91□□□□□ -0.18
CACNA1BQ00975 AC087072.1-201ENST00000603727 421 ntBASIC13.91□□□□□ -0.18
CACNA1BQ00975 AC006483.2-201ENST00000609813 515 ntBASIC13.91□□□□□ -0.18
CACNA1BQ00975 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CACNA1BQ00975 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CACNA1BQ00975 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CACNA1BQ00975 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CACNA1BQ00975 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 TPT1P11-201ENST00000458482 498 ntBASIC13.9□□□□□ -0.18
CACNA1BQ00975 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 SRP14-208ENST00000560773 468 ntTSL 3 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC13.9□□□□□ -0.18
CACNA1BQ00975 AC008972.2-201ENST00000606587 494 ntBASIC13.9□□□□□ -0.18
CACNA1BQ00975 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms