Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.66□□□□□ -0.22
ACTA1P68133 SERBP1P3-201ENST00000459980 809 ntBASIC13.66□□□□□ -0.22
ACTA1P68133 KRT18P43-201ENST00000469825 1281 ntBASIC13.66□□□□□ -0.22
ACTA1P68133 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
ACTA1P68133 PGAM5P1-201ENST00000518923 814 ntBASIC13.66□□□□□ -0.22
ACTA1P68133 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.66□□□□□ -0.22
ACTA1P68133 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 RN7SL828P-201ENST00000607615 303 ntBASIC13.66□□□□□ -0.22
ACTA1P68133 AC003101.2-201ENST00000612557 442 ntBASIC13.66□□□□□ -0.22
ACTA1P68133 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.66□□□□□ -0.22
ACTA1P68133 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ACTA1P68133 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.66□□□□□ -0.22
ACTA1P68133 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ACTA1P68133 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.66□□□□□ -0.22
ACTA1P68133 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ACTA1P68133 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.66□□□□□ -0.22
ACTA1P68133 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.65□□□□□ -0.22
ACTA1P68133 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
ACTA1P68133 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.65□□□□□ -0.22
ACTA1P68133 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
ACTA1P68133 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.65□□□□□ -0.22
ACTA1P68133 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.65□□□□□ -0.22
ACTA1P68133 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.65□□□□□ -0.22
ACTA1P68133 AC041040.2-201ENST00000622926 2899 ntBASIC13.65□□□□□ -0.22
ACTA1P68133 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.65□□□□□ -0.22
ACTA1P68133 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.65□□□□□ -0.22
ACTA1P68133 AC005237.2-201ENST00000434368 219 ntBASIC13.65□□□□□ -0.22
ACTA1P68133 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.65□□□□□ -0.22
ACTA1P68133 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.65□□□□□ -0.22
ACTA1P68133 TPT1P11-201ENST00000458482 498 ntBASIC13.65□□□□□ -0.22
ACTA1P68133 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.65□□□□□ -0.22
ACTA1P68133 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.65□□□□□ -0.22
ACTA1P68133 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.65□□□□□ -0.22
ACTA1P68133 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.65□□□□□ -0.22
ACTA1P68133 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.65□□□□□ -0.22
ACTA1P68133 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.65□□□□□ -0.22
ACTA1P68133 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
ACTA1P68133 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.65□□□□□ -0.22
ACTA1P68133 AL133215.2-201ENST00000609242 977 ntBASIC13.65□□□□□ -0.22
ACTA1P68133 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.65□□□□□ -0.22
ACTA1P68133 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.65□□□□□ -0.22
ACTA1P68133 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
ACTA1P68133 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ACTA1P68133 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
ACTA1P68133 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ACTA1P68133 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ACTA1P68133 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.64□□□□□ -0.23
ACTA1P68133 AL359881.3-201ENST00000602640 1721 ntBASIC13.64□□□□□ -0.23
ACTA1P68133 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ACTA1P68133 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ACTA1P68133 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ACTA1P68133 AC092135.3-201ENST00000624151 1846 ntBASIC13.64□□□□□ -0.23
ACTA1P68133 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.64□□□□□ -0.23
ACTA1P68133 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.64□□□□□ -0.23
ACTA1P68133 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.64□□□□□ -0.23
ACTA1P68133 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.64□□□□□ -0.23
ACTA1P68133 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ACTA1P68133 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ACTA1P68133 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
ACTA1P68133 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms