Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SLC25A6P4-201ENST00000586535 553 ntBASIC17.19■□□□□ 0.34
TPM4P67936 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.19■□□□□ 0.34
TPM4P67936 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.19■□□□□ 0.34
TPM4P67936 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TPM4P67936 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
TPM4P67936 ARHGAP23P1-201ENST00000562773 1937 ntBASIC17.19■□□□□ 0.34
TPM4P67936 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TPM4P67936 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TPM4P67936 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC17.19■□□□□ 0.34
TPM4P67936 AC006504.5-208ENST00000588784 2401 ntBASIC17.19■□□□□ 0.34
TPM4P67936 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
TPM4P67936 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TPM4P67936 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TPM4P67936 HLA-A-201ENST00000376802 1334 ntBASIC17.19■□□□□ 0.34
TPM4P67936 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TPM4P67936 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC17.19■□□□□ 0.34
TPM4P67936 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TPM4P67936 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TPM4P67936 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.18■□□□□ 0.34
TPM4P67936 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC17.18■□□□□ 0.34
TPM4P67936 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TPM4P67936 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC17.18■□□□□ 0.34
TPM4P67936 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TPM4P67936 ZNF259P1-201ENST00000407656 1365 ntBASIC17.18■□□□□ 0.34
TPM4P67936 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TPM4P67936 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TPM4P67936 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
TPM4P67936 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TPM4P67936 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.18■□□□□ 0.34
TPM4P67936 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.18■□□□□ 0.34
TPM4P67936 AL591424.1-201ENST00000442569 1213 ntBASIC17.18■□□□□ 0.34
TPM4P67936 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.18■□□□□ 0.34
TPM4P67936 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.18■□□□□ 0.34
TPM4P67936 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.18■□□□□ 0.34
TPM4P67936 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.18■□□□□ 0.34
TPM4P67936 LINC01225-203ENST00000563550 1244 ntBASIC17.18■□□□□ 0.34
TPM4P67936 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.18■□□□□ 0.34
TPM4P67936 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.18■□□□□ 0.34
TPM4P67936 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TPM4P67936 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.18■□□□□ 0.34
TPM4P67936 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.18■□□□□ 0.34
TPM4P67936 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC17.18■□□□□ 0.34
TPM4P67936 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
TPM4P67936 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TPM4P67936 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.18■□□□□ 0.34
TPM4P67936 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM4P67936 HSPA7-201ENST00000445535 1927 ntBASIC17.17■□□□□ 0.34
TPM4P67936 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM4P67936 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM4P67936 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM4P67936 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM4P67936 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM4P67936 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TPM4P67936 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM4P67936 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM4P67936 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM4P67936 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.17■□□□□ 0.34
TPM4P67936 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TPM4P67936 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TPM4P67936 AL450487.1-201ENST00000426799 995 ntBASIC17.17■□□□□ 0.34
TPM4P67936 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM4P67936 PTENP1-202ENST00000532280 3996 ntBASIC17.17■□□□□ 0.34
TPM4P67936 SLC25A39P2-201ENST00000537614 270 ntBASIC17.17■□□□□ 0.34
TPM4P67936 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.17■□□□□ 0.34
TPM4P67936 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.17■□□□□ 0.34
TPM4P67936 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.17■□□□□ 0.34
TPM4P67936 AC055717.3-201ENST00000622967 595 ntBASIC17.17■□□□□ 0.34
TPM4P67936 AC079781.5-202ENST00000641784 3743 ntBASIC17.17■□□□□ 0.34
TPM4P67936 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM4P67936 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM4P67936 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM4P67936 FUK-202ENST00000378912 3925 ntTSL 2 BASIC17.17■□□□□ 0.34
TPM4P67936 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TPM4P67936 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TPM4P67936 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC17.17■□□□□ 0.34
TPM4P67936 AC018529.2-202ENST00000611482 3087 ntBASIC17.17■□□□□ 0.34
TPM4P67936 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms