Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC10.83□□□□□ -0.68
CKS1BP61024 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC10.83□□□□□ -0.68
CKS1BP61024 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
CKS1BP61024 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS1BP61024 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 PES1-204ENST00000402284 2144 ntTSL 5 BASIC10.82□□□□□ -0.68
CKS1BP61024 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS1BP61024 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS1BP61024 MIR497HG-202ENST00000572453 3838 ntBASIC10.82□□□□□ -0.68
CKS1BP61024 AC004241.1-201ENST00000547799 3299 ntTSL 5 BASIC10.82□□□□□ -0.68
CKS1BP61024 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 NPTN-IT1-201ENST00000628401 2283 ntBASIC10.82□□□□□ -0.68
CKS1BP61024 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS1BP61024 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 CA14-201ENST00000369111 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
CKS1BP61024 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 SAPCD2P3-201ENST00000455031 850 ntBASIC10.82□□□□□ -0.68
CKS1BP61024 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CKS1BP61024 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS1BP61024 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS1BP61024 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS1BP61024 AC021087.4-201ENST00000563761 564 ntBASIC10.82□□□□□ -0.68
CKS1BP61024 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
CKS1BP61024 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS1BP61024 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC10.82□□□□□ -0.68
CKS1BP61024 AC025062.2-201ENST00000605477 670 ntBASIC10.82□□□□□ -0.68
CKS1BP61024 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS1BP61024 AL031055.1-201ENST00000606362 631 ntBASIC10.82□□□□□ -0.68
CKS1BP61024 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC10.82□□□□□ -0.68
CKS1BP61024 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CKS1BP61024 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS1BP61024 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CKS1BP61024 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS1BP61024 AC020658.6-201ENST00000623564 1870 ntBASIC10.82□□□□□ -0.68
CKS1BP61024 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS1BP61024 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS1BP61024 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS1BP61024 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 MAP4K2-201ENST00000294066 7178 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
CKS1BP61024 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC10.82□□□□□ -0.68
CKS1BP61024 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
CKS1BP61024 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS1BP61024 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC10.82□□□□□ -0.68
CKS1BP61024 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 CYP51A1P2-201ENST00000419457 1499 ntBASIC10.81□□□□□ -0.68
CKS1BP61024 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 FZD7-201ENST00000286201 3859 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
CKS1BP61024 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
CKS1BP61024 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC10.81□□□□□ -0.68
CKS1BP61024 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CKS1BP61024 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CKS1BP61024 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC10.81□□□□□ -0.68
CKS1BP61024 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 RPS2P28-201ENST00000314255 741 ntBASIC10.81□□□□□ -0.68
CKS1BP61024 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CKS1BP61024 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC10.81□□□□□ -0.68
CKS1BP61024 FAM210CP-201ENST00000445714 574 ntBASIC10.81□□□□□ -0.68
CKS1BP61024 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
CKS1BP61024 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC10.81□□□□□ -0.68
CKS1BP61024 MMP17-203ENST00000535004 719 ntTSL 3 BASIC10.81□□□□□ -0.68
CKS1BP61024 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms