Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CLDN20P56880 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC14.06□□□□□ -0.16
CLDN20P56880 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.06□□□□□ -0.16
CLDN20P56880 AC005225.4-201ENST00000557330 545 ntBASIC14.06□□□□□ -0.16
CLDN20P56880 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN20P56880 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.06□□□□□ -0.16
CLDN20P56880 AC012645.4-201ENST00000610691 1061 ntBASIC14.06□□□□□ -0.16
CLDN20P56880 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN20P56880 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.06□□□□□ -0.16
CLDN20P56880 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CLDN20P56880 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CLDN20P56880 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CLDN20P56880 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CLDN20P56880 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN20P56880 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.05□□□□□ -0.16
CLDN20P56880 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLDN20P56880 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN20P56880 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLDN20P56880 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDN20P56880 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN20P56880 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN20P56880 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CLDN20P56880 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN20P56880 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN20P56880 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN20P56880 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
CLDN20P56880 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDN20P56880 AL133267.1-201ENST00000398220 340 ntBASIC14.05□□□□□ -0.16
CLDN20P56880 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
CLDN20P56880 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN20P56880 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLDN20P56880 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN20P56880 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CLDN20P56880 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN20P56880 AC092552.1-201ENST00000547243 906 ntBASIC14.05□□□□□ -0.16
CLDN20P56880 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
CLDN20P56880 AC015910.1-201ENST00000579400 975 ntBASIC14.05□□□□□ -0.16
CLDN20P56880 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.05□□□□□ -0.16
CLDN20P56880 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN20P56880 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
CLDN20P56880 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN20P56880 AC000095.1-201ENST00000603208 874 ntBASIC14.05□□□□□ -0.16
CLDN20P56880 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDN20P56880 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.05□□□□□ -0.16
CLDN20P56880 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN20P56880 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN20P56880 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN20P56880 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN20P56880 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC14.05□□□□□ -0.16
CLDN20P56880 AL358472.5-202ENST00000641448 1267 ntBASIC14.05□□□□□ -0.16
CLDN20P56880 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CLDN20P56880 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN20P56880 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN20P56880 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CLDN20P56880 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN20P56880 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN20P56880 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
CLDN20P56880 AC015656.1-201ENST00000624209 3578 ntBASIC14.05□□□□□ -0.16
CLDN20P56880 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CLDN20P56880 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDN20P56880 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN20P56880 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN20P56880 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.05□□□□□ -0.16
CLDN20P56880 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CLDN20P56880 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CLDN20P56880 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
CLDN20P56880 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CLDN20P56880 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.04□□□□□ -0.16
CLDN20P56880 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN20P56880 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN20P56880 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.04□□□□□ -0.16
CLDN20P56880 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN20P56880 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CLDN20P56880 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN20P56880 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CLDN20P56880 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.04□□□□□ -0.16
CLDN20P56880 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CLDN20P56880 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms