Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CDH12P55289 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CDH12P55289 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH12P55289 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH12P55289 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH12P55289 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.3□□□□□ -0.12
CDH12P55289 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH12P55289 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH12P55289 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CDH12P55289 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDH12P55289 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH12P55289 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH12P55289 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDH12P55289 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH12P55289 AP006288.1-201ENST00000446065 395 ntBASIC14.3□□□□□ -0.12
CDH12P55289 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH12P55289 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.3□□□□□ -0.12
CDH12P55289 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.3□□□□□ -0.12
CDH12P55289 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CDH12P55289 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH12P55289 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CDH12P55289 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH12P55289 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.3□□□□□ -0.12
CDH12P55289 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH12P55289 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH12P55289 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.3□□□□□ -0.12
CDH12P55289 AC027612.4-201ENST00000605371 583 ntBASIC14.3□□□□□ -0.12
CDH12P55289 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.3□□□□□ -0.12
CDH12P55289 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH12P55289 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CDH12P55289 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH12P55289 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH12P55289 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH12P55289 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH12P55289 CETN4P-206ENST00000642099 2168 ntBASIC14.3□□□□□ -0.12
CDH12P55289 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH12P55289 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CDH12P55289 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH12P55289 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CDH12P55289 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.3□□□□□ -0.12
CDH12P55289 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CDH12P55289 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.29□□□□□ -0.12
CDH12P55289 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 AC018529.2-202ENST00000611482 3087 ntBASIC14.29□□□□□ -0.12
CDH12P55289 AC104581.4-201ENST00000623126 3052 ntBASIC14.29□□□□□ -0.12
CDH12P55289 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDH12P55289 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 AC097359.2-201ENST00000604992 2389 ntBASIC14.29□□□□□ -0.12
CDH12P55289 AC005840.4-201ENST00000541242 2494 ntBASIC14.29□□□□□ -0.12
CDH12P55289 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH12P55289 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH12P55289 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.29□□□□□ -0.12
CDH12P55289 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 AL080243.2-201ENST00000418783 582 ntBASIC14.29□□□□□ -0.12
CDH12P55289 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.29□□□□□ -0.12
CDH12P55289 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.29□□□□□ -0.12
CDH12P55289 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH12P55289 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH12P55289 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.29□□□□□ -0.12
CDH12P55289 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.29□□□□□ -0.12
CDH12P55289 SNHG9-202ENST00000564014 471 ntBASIC14.29□□□□□ -0.12
CDH12P55289 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.29□□□□□ -0.12
CDH12P55289 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 MIR6069-201ENST00000620069 79 ntBASIC14.29□□□□□ -0.12
CDH12P55289 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDH12P55289 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.29□□□□□ -0.12
CDH12P55289 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH12P55289 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.29□□□□□ -0.12
CDH12P55289 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CDH12P55289 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CDH12P55289 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
CDH12P55289 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
CDH12P55289 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH12P55289 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH12P55289 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.28□□□□□ -0.12
CDH12P55289 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH12P55289 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH12P55289 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CDH12P55289 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CDH12P55289 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms