Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.66■□□□□ 0.26
NCKAP1LP55160 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NCKAP1LP55160 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NCKAP1LP55160 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.66■□□□□ 0.26
NCKAP1LP55160 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
NCKAP1LP55160 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
NCKAP1LP55160 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
NCKAP1LP55160 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.66■□□□□ 0.26
NCKAP1LP55160 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
NCKAP1LP55160 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.66■□□□□ 0.26
NCKAP1LP55160 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.66■□□□□ 0.26
NCKAP1LP55160 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NCKAP1LP55160 AC004466.1-201ENST00000599515 1080 ntBASIC16.66■□□□□ 0.26
NCKAP1LP55160 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NCKAP1LP55160 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 AJ011931.1-201ENST00000618749 2492 ntBASIC16.66■□□□□ 0.26
NCKAP1LP55160 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.66■□□□□ 0.26
NCKAP1LP55160 AC132938.4-201ENST00000623835 848 ntBASIC16.66■□□□□ 0.26
NCKAP1LP55160 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 AC023090.2-201ENST00000625182 2110 ntBASIC16.66■□□□□ 0.26
NCKAP1LP55160 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
NCKAP1LP55160 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.66■□□□□ 0.26
NCKAP1LP55160 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NCKAP1LP55160 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NCKAP1LP55160 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCKAP1LP55160 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCKAP1LP55160 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCKAP1LP55160 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCKAP1LP55160 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCKAP1LP55160 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCKAP1LP55160 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCKAP1LP55160 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCKAP1LP55160 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCKAP1LP55160 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCKAP1LP55160 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCKAP1LP55160 POM121L8P-201ENST00000417732 1281 ntBASIC16.65■□□□□ 0.26
NCKAP1LP55160 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 AC016694.1-201ENST00000434179 700 ntBASIC16.65■□□□□ 0.26
NCKAP1LP55160 POM121L9P-203ENST00000441984 1285 ntBASIC16.65■□□□□ 0.26
NCKAP1LP55160 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 AC007551.1-201ENST00000457394 519 ntBASIC16.65■□□□□ 0.26
NCKAP1LP55160 KRT90P-201ENST00000549264 1064 ntBASIC16.65■□□□□ 0.26
NCKAP1LP55160 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 AL512343.1-201ENST00000605837 169 ntBASIC16.65■□□□□ 0.26
NCKAP1LP55160 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 ETV2-208ENST00000621247 941 ntTSL 5 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 ENPP7P14-201ENST00000621765 1040 ntBASIC16.65■□□□□ 0.26
NCKAP1LP55160 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCKAP1LP55160 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCKAP1LP55160 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCKAP1LP55160 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCKAP1LP55160 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.65■□□□□ 0.26
NCKAP1LP55160 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCKAP1LP55160 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NCKAP1LP55160 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
NCKAP1LP55160 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
NCKAP1LP55160 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
NCKAP1LP55160 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms