Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC11.19□□□□□ -0.62
APOC4P55056 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC11.19□□□□□ -0.62
APOC4P55056 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 AC010328.2-201ENST00000597698 1111 ntBASIC11.19□□□□□ -0.62
APOC4P55056 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
APOC4P55056 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
APOC4P55056 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
APOC4P55056 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC11.19□□□□□ -0.62
APOC4P55056 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
APOC4P55056 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 AL354989.2-201ENST00000435838 1540 ntBASIC11.19□□□□□ -0.62
APOC4P55056 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC11.19□□□□□ -0.62
APOC4P55056 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
APOC4P55056 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC11.19□□□□□ -0.62
APOC4P55056 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
APOC4P55056 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
APOC4P55056 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC11.19□□□□□ -0.62
APOC4P55056 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC11.18□□□□□ -0.62
APOC4P55056 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
APOC4P55056 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
APOC4P55056 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC11.18□□□□□ -0.62
APOC4P55056 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
APOC4P55056 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC11.18□□□□□ -0.62
APOC4P55056 TNRC18P3-201ENST00000441896 2691 ntBASIC11.18□□□□□ -0.62
APOC4P55056 AHCYP2-201ENST00000430630 1300 ntBASIC11.18□□□□□ -0.62
APOC4P55056 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC11.18□□□□□ -0.62
APOC4P55056 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
APOC4P55056 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
APOC4P55056 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC11.18□□□□□ -0.62
APOC4P55056 BRWD1P1-201ENST00000401091 371 ntBASIC11.18□□□□□ -0.62
APOC4P55056 CNN2P8-201ENST00000421872 913 ntBASIC11.18□□□□□ -0.62
APOC4P55056 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC11.18□□□□□ -0.62
APOC4P55056 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.18□□□□□ -0.62
APOC4P55056 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.18□□□□□ -0.62
APOC4P55056 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC11.18□□□□□ -0.62
APOC4P55056 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC11.18□□□□□ -0.62
APOC4P55056 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC11.18□□□□□ -0.62
APOC4P55056 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC11.18□□□□□ -0.62
APOC4P55056 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 GNRHR2-203ENST00000581100 1187 ntBASIC11.18□□□□□ -0.62
APOC4P55056 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC11.18□□□□□ -0.62
APOC4P55056 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC11.18□□□□□ -0.62
APOC4P55056 AC244669.2-201ENST00000612320 853 ntBASIC11.18□□□□□ -0.62
APOC4P55056 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
APOC4P55056 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC11.18□□□□□ -0.62
APOC4P55056 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC11.18□□□□□ -0.62
APOC4P55056 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC11.18□□□□□ -0.62
APOC4P55056 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
APOC4P55056 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
APOC4P55056 AC012508.2-201ENST00000567613 1472 ntBASIC11.18□□□□□ -0.62
APOC4P55056 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
APOC4P55056 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.17□□□□□ -0.62
APOC4P55056 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC11.17□□□□□ -0.62
APOC4P55056 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
APOC4P55056 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
APOC4P55056 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
APOC4P55056 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
APOC4P55056 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms