Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC16.8■□□□□ 0.28
PMS1P54277 BASP1P1-201ENST00000430708 665 ntBASIC16.8■□□□□ 0.28
PMS1P54277 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.8■□□□□ 0.28
PMS1P54277 AL512638.1-201ENST00000457493 794 ntBASIC16.8■□□□□ 0.28
PMS1P54277 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMS1P54277 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PMS1P54277 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.8■□□□□ 0.28
PMS1P54277 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.8■□□□□ 0.28
PMS1P54277 AC036164.1-201ENST00000570544 333 ntBASIC16.8■□□□□ 0.28
PMS1P54277 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.8■□□□□ 0.28
PMS1P54277 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.8■□□□□ 0.28
PMS1P54277 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.8■□□□□ 0.28
PMS1P54277 AC023090.2-201ENST00000625182 2110 ntBASIC16.8■□□□□ 0.28
PMS1P54277 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC16.8■□□□□ 0.28
PMS1P54277 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
PMS1P54277 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMS1P54277 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMS1P54277 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.8■□□□□ 0.28
PMS1P54277 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMS1P54277 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PMS1P54277 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PMS1P54277 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.8■□□□□ 0.28
PMS1P54277 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMS1P54277 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.8■□□□□ 0.28
PMS1P54277 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PMS1P54277 AC113367.3-201ENST00000508316 1912 ntBASIC16.8■□□□□ 0.28
PMS1P54277 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PMS1P54277 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.8■□□□□ 0.28
PMS1P54277 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
PMS1P54277 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PMS1P54277 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PMS1P54277 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.79■□□□□ 0.28
PMS1P54277 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.79■□□□□ 0.28
PMS1P54277 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PMS1P54277 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PMS1P54277 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PMS1P54277 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
PMS1P54277 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PMS1P54277 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.79■□□□□ 0.28
PMS1P54277 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PMS1P54277 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.79■□□□□ 0.28
PMS1P54277 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PMS1P54277 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PMS1P54277 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PMS1P54277 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PMS1P54277 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PMS1P54277 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.79■□□□□ 0.28
PMS1P54277 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.79■□□□□ 0.28
PMS1P54277 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
PMS1P54277 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.79■□□□□ 0.28
PMS1P54277 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.79■□□□□ 0.28
PMS1P54277 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.79■□□□□ 0.28
PMS1P54277 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.79■□□□□ 0.28
PMS1P54277 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.79■□□□□ 0.28
PMS1P54277 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.79■□□□□ 0.28
PMS1P54277 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.79■□□□□ 0.28
PMS1P54277 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PMS1P54277 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
PMS1P54277 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PMS1P54277 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
PMS1P54277 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PMS1P54277 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.79■□□□□ 0.28
PMS1P54277 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PMS1P54277 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PMS1P54277 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PMS1P54277 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PMS1P54277 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.78■□□□□ 0.28
PMS1P54277 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PMS1P54277 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PMS1P54277 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.78■□□□□ 0.28
PMS1P54277 BX640514.1-201ENST00000583223 1918 ntBASIC16.78■□□□□ 0.28
PMS1P54277 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.78■□□□□ 0.28
PMS1P54277 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.78■□□□□ 0.28
PMS1P54277 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PMS1P54277 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
PMS1P54277 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PMS1P54277 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PMS1P54277 PMS2P2-201ENST00000425039 1128 ntBASIC16.78■□□□□ 0.28
PMS1P54277 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.78■□□□□ 0.28
PMS1P54277 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.78■□□□□ 0.28
PMS1P54277 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC16.78■□□□□ 0.28
PMS1P54277 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PMS1P54277 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.78■□□□□ 0.28
PMS1P54277 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PMS1P54277 GPALPP1-207ENST00000611650 899 ntBASIC16.78■□□□□ 0.28
PMS1P54277 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.78■□□□□ 0.28
PMS1P54277 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PMS1P54277 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PMS1P54277 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.78■□□□□ 0.28
PMS1P54277 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
PMS1P54277 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PMS1P54277 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PMS1P54277 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PMS1P54277 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PMS1P54277 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC16.78■□□□□ 0.28
PMS1P54277 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PMS1P54277 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PMS1P54277 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
PMS1P54277 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PMS1P54277 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms