Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.94■□□□□ 0.14
CLCN4P51793 CICP6-201ENST00000457191 2729 ntBASIC15.94■□□□□ 0.14
CLCN4P51793 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.94■□□□□ 0.14
CLCN4P51793 AC091046.1-201ENST00000331871 207 ntBASIC15.94■□□□□ 0.14
CLCN4P51793 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.94■□□□□ 0.14
CLCN4P51793 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC15.94■□□□□ 0.14
CLCN4P51793 AC011742.3-201ENST00000439053 820 ntBASIC15.94■□□□□ 0.14
CLCN4P51793 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.94■□□□□ 0.14
CLCN4P51793 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC15.94■□□□□ 0.14
CLCN4P51793 AC106794.1-201ENST00000506935 792 ntBASIC15.94■□□□□ 0.14
CLCN4P51793 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.94■□□□□ 0.14
CLCN4P51793 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.94■□□□□ 0.14
CLCN4P51793 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.94■□□□□ 0.14
CLCN4P51793 MIR4683-201ENST00000579659 81 ntBASIC15.94■□□□□ 0.14
CLCN4P51793 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 AC026740.1-201ENST00000607068 791 ntBASIC15.94■□□□□ 0.14
CLCN4P51793 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.94■□□□□ 0.14
CLCN4P51793 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.94■□□□□ 0.14
CLCN4P51793 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
CLCN4P51793 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
CLCN4P51793 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.94■□□□□ 0.14
CLCN4P51793 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.94■□□□□ 0.14
CLCN4P51793 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
CLCN4P51793 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN4P51793 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN4P51793 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN4P51793 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN4P51793 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CLCN4P51793 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN4P51793 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CLCN4P51793 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.93■□□□□ 0.14
CLCN4P51793 AC008132.1-202ENST00000342005 1389 ntBASIC15.93■□□□□ 0.14
CLCN4P51793 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN4P51793 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN4P51793 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN4P51793 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CLCN4P51793 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
CLCN4P51793 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
CLCN4P51793 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.93■□□□□ 0.14
CLCN4P51793 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN4P51793 GHSR-202ENST00000427970 912 ntBASIC15.93■□□□□ 0.14
CLCN4P51793 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN4P51793 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.93■□□□□ 0.14
CLCN4P51793 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.93■□□□□ 0.14
CLCN4P51793 TUBB8P8-201ENST00000458717 1058 ntBASIC15.93■□□□□ 0.14
CLCN4P51793 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.93■□□□□ 0.14
CLCN4P51793 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.93■□□□□ 0.14
CLCN4P51793 AC024681.1-201ENST00000521917 487 ntBASIC15.93■□□□□ 0.14
CLCN4P51793 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
CLCN4P51793 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.93■□□□□ 0.14
CLCN4P51793 FGFR3P5-201ENST00000564496 886 ntBASIC15.93■□□□□ 0.14
CLCN4P51793 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.93■□□□□ 0.14
CLCN4P51793 MIR4722-201ENST00000578292 60 ntBASIC15.93■□□□□ 0.14
CLCN4P51793 RN7SL574P-201ENST00000581512 297 ntBASIC15.93■□□□□ 0.14
CLCN4P51793 MIR4706-201ENST00000582134 82 ntBASIC15.93■□□□□ 0.14
CLCN4P51793 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.93■□□□□ 0.14
CLCN4P51793 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN4P51793 AL358472.3-201ENST00000608147 415 ntBASIC15.93■□□□□ 0.14
CLCN4P51793 AC004923.1-202ENST00000642106 209 ntBASIC15.93■□□□□ 0.14
CLCN4P51793 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN4P51793 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN4P51793 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN4P51793 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN4P51793 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN4P51793 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.93■□□□□ 0.14
CLCN4P51793 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.93■□□□□ 0.14
CLCN4P51793 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN4P51793 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN4P51793 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CLCN4P51793 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CLCN4P51793 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN4P51793 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN4P51793 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN4P51793 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN4P51793 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN4P51793 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN4P51793 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
CLCN4P51793 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.92■□□□□ 0.14
CLCN4P51793 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.92■□□□□ 0.14
CLCN4P51793 AC009090.5-201ENST00000624886 2285 ntBASIC15.92■□□□□ 0.14
CLCN4P51793 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CLCN4P51793 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 684.3 ms