Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AL353726.2-201ENST00000623259 884 ntBASIC16.75■□□□□ 0.27
CPT1AP50416 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CPT1AP50416 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.75■□□□□ 0.27
CPT1AP50416 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPT1AP50416 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPT1AP50416 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.75■□□□□ 0.27
CPT1AP50416 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPT1AP50416 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.75■□□□□ 0.27
CPT1AP50416 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CPT1AP50416 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPT1AP50416 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPT1AP50416 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.75■□□□□ 0.27
CPT1AP50416 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.75■□□□□ 0.27
CPT1AP50416 AL157791.1-201ENST00000553667 1699 ntBASIC16.75■□□□□ 0.27
CPT1AP50416 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPT1AP50416 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.74■□□□□ 0.27
CPT1AP50416 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.74■□□□□ 0.27
CPT1AP50416 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.74■□□□□ 0.27
CPT1AP50416 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 AC020910.5-201ENST00000623668 1865 ntBASIC16.74■□□□□ 0.27
CPT1AP50416 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CPT1AP50416 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.74■□□□□ 0.27
CPT1AP50416 E2F3P2-201ENST00000447755 1422 ntBASIC16.74■□□□□ 0.27
CPT1AP50416 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.74■□□□□ 0.27
CPT1AP50416 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.74■□□□□ 0.27
CPT1AP50416 AC006335.1-201ENST00000445200 547 ntBASIC16.74■□□□□ 0.27
CPT1AP50416 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.74■□□□□ 0.27
CPT1AP50416 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC16.74■□□□□ 0.27
CPT1AP50416 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.74■□□□□ 0.27
CPT1AP50416 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CPT1AP50416 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
CPT1AP50416 MIR3907-201ENST00000579424 151 ntBASIC16.74■□□□□ 0.27
CPT1AP50416 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.74■□□□□ 0.27
CPT1AP50416 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.74■□□□□ 0.27
CPT1AP50416 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
CPT1AP50416 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 AC099398.1-201ENST00000567919 2776 ntBASIC16.74■□□□□ 0.27
CPT1AP50416 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
CPT1AP50416 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CPT1AP50416 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CPT1AP50416 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPT1AP50416 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPT1AP50416 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CPT1AP50416 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPT1AP50416 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.73■□□□□ 0.27
CPT1AP50416 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPT1AP50416 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPT1AP50416 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CPT1AP50416 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPT1AP50416 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPT1AP50416 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPT1AP50416 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.73■□□□□ 0.27
CPT1AP50416 FXNP2-201ENST00000411625 547 ntBASIC16.73■□□□□ 0.27
CPT1AP50416 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC16.73■□□□□ 0.27
CPT1AP50416 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC16.73■□□□□ 0.27
CPT1AP50416 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.73■□□□□ 0.27
CPT1AP50416 RPL18P13-201ENST00000478088 569 ntBASIC16.73■□□□□ 0.27
CPT1AP50416 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.73■□□□□ 0.27
CPT1AP50416 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.73■□□□□ 0.27
CPT1AP50416 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC16.73■□□□□ 0.27
CPT1AP50416 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPT1AP50416 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.73■□□□□ 0.27
CPT1AP50416 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CPT1AP50416 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPT1AP50416 AC128714.1-201ENST00000637035 887 ntBASIC16.73■□□□□ 0.27
CPT1AP50416 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPT1AP50416 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CPT1AP50416 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPT1AP50416 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPT1AP50416 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
CPT1AP50416 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPT1AP50416 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.73■□□□□ 0.27
CPT1AP50416 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CPT1AP50416 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPT1AP50416 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CPT1AP50416 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CPT1AP50416 AL138725.1-201ENST00000407347 1314 ntBASIC16.72■□□□□ 0.27
CPT1AP50416 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CPT1AP50416 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms