Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 RN7SL828P-201ENST00000607615 303 ntBASIC14.47□□□□□ -0.09
CLK1P49759 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.47□□□□□ -0.09
CLK1P49759 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CLK1P49759 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.47□□□□□ -0.09
CLK1P49759 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CLK1P49759 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 CYP4F24P-201ENST00000586049 1580 ntBASIC14.47□□□□□ -0.09
CLK1P49759 AL031595.1-201ENST00000623969 4709 ntBASIC14.47□□□□□ -0.09
CLK1P49759 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.47□□□□□ -0.09
CLK1P49759 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.47□□□□□ -0.09
CLK1P49759 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 AJ011931.1-201ENST00000618749 2492 ntBASIC14.47□□□□□ -0.09
CLK1P49759 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLK1P49759 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLK1P49759 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
CLK1P49759 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLK1P49759 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.46□□□□□ -0.09
CLK1P49759 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLK1P49759 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
CLK1P49759 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLK1P49759 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.46□□□□□ -0.09
CLK1P49759 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.46□□□□□ -0.09
CLK1P49759 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.46□□□□□ -0.09
CLK1P49759 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.46□□□□□ -0.09
CLK1P49759 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.46□□□□□ -0.09
CLK1P49759 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
CLK1P49759 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLK1P49759 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CLK1P49759 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLK1P49759 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLK1P49759 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLK1P49759 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLK1P49759 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLK1P49759 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.46□□□□□ -0.09
CLK1P49759 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.46□□□□□ -0.09
CLK1P49759 FO393414.2-201ENST00000405153 598 ntBASIC14.46□□□□□ -0.09
CLK1P49759 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.46□□□□□ -0.09
CLK1P49759 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.46□□□□□ -0.09
CLK1P49759 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLK1P49759 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.46□□□□□ -0.09
CLK1P49759 AC109322.1-201ENST00000524499 1264 ntBASIC14.46□□□□□ -0.09
CLK1P49759 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLK1P49759 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.46□□□□□ -0.09
CLK1P49759 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.46□□□□□ -0.09
CLK1P49759 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.46□□□□□ -0.09
CLK1P49759 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.46□□□□□ -0.09
CLK1P49759 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.46□□□□□ -0.09
CLK1P49759 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLK1P49759 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLK1P49759 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CLK1P49759 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLK1P49759 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
CLK1P49759 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLK1P49759 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLK1P49759 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLK1P49759 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLK1P49759 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLK1P49759 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLK1P49759 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLK1P49759 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.46□□□□□ -0.1
CLK1P49759 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.46□□□□□ -0.1
CLK1P49759 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLK1P49759 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLK1P49759 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CLK1P49759 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLK1P49759 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLK1P49759 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.45□□□□□ -0.1
CLK1P49759 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.45□□□□□ -0.1
CLK1P49759 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.45□□□□□ -0.1
CLK1P49759 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CLK1P49759 DMBT1P1-203ENST00000636837 4628 ntBASIC14.45□□□□□ -0.1
CLK1P49759 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.45□□□□□ -0.1
CLK1P49759 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 AL139400.1-201ENST00000366220 510 ntBASIC14.45□□□□□ -0.1
CLK1P49759 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CLK1P49759 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLK1P49759 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
CLK1P49759 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.45□□□□□ -0.1
CLK1P49759 AL136982.4-201ENST00000437689 1740 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms