Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
SOX2P48431 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.24
SOX2P48431 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SOX2P48431 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.52□□□□□ -0.24
SOX2P48431 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
SOX2P48431 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.52□□□□□ -0.24
SOX2P48431 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SOX2P48431 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.24
SOX2P48431 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SOX2P48431 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
SOX2P48431 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
SOX2P48431 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
SOX2P48431 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SOX2P48431 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
SOX2P48431 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SOX2P48431 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
SOX2P48431 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.52□□□□□ -0.24
SOX2P48431 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SOX2P48431 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SOX2P48431 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SOX2P48431 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SOX2P48431 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SOX2P48431 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SOX2P48431 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
SOX2P48431 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SOX2P48431 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SOX2P48431 MIR940-201ENST00000401276 94 ntBASIC13.52□□□□□ -0.25
SOX2P48431 GHSR-202ENST00000427970 912 ntBASIC13.52□□□□□ -0.25
SOX2P48431 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.52□□□□□ -0.25
SOX2P48431 TARDBPP1-201ENST00000442013 1203 ntBASIC13.52□□□□□ -0.25
SOX2P48431 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC13.52□□□□□ -0.25
SOX2P48431 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.52□□□□□ -0.25
SOX2P48431 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.52□□□□□ -0.25
SOX2P48431 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
SOX2P48431 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.52□□□□□ -0.25
SOX2P48431 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.52□□□□□ -0.25
SOX2P48431 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.52□□□□□ -0.25
SOX2P48431 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.52□□□□□ -0.25
SOX2P48431 AC011467.4-201ENST00000594891 528 ntBASIC13.52□□□□□ -0.25
SOX2P48431 AC138969.2-201ENST00000532739 9932 ntBASIC13.52□□□□□ -0.25
SOX2P48431 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
SOX2P48431 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SOX2P48431 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SOX2P48431 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC13.52□□□□□ -0.25
SOX2P48431 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.52□□□□□ -0.25
SOX2P48431 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SOX2P48431 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SOX2P48431 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SOX2P48431 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
SOX2P48431 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SOX2P48431 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.52□□□□□ -0.25
SOX2P48431 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SOX2P48431 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SOX2P48431 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SOX2P48431 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.52□□□□□ -0.25
SOX2P48431 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SOX2P48431 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.52□□□□□ -0.25
SOX2P48431 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SOX2P48431 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SOX2P48431 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
SOX2P48431 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.51□□□□□ -0.25
SOX2P48431 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SOX2P48431 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.51□□□□□ -0.25
SOX2P48431 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SOX2P48431 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SOX2P48431 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SOX2P48431 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.51□□□□□ -0.25
SOX2P48431 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
SOX2P48431 AC027601.5-201ENST00000624065 2482 ntBASIC13.51□□□□□ -0.25
SOX2P48431 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.51□□□□□ -0.25
SOX2P48431 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SOX2P48431 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.51□□□□□ -0.25
SOX2P48431 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SOX2P48431 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.51□□□□□ -0.25
SOX2P48431 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SOX2P48431 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.51□□□□□ -0.25
SOX2P48431 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SOX2P48431 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SOX2P48431 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.51□□□□□ -0.25
SOX2P48431 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SOX2P48431 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.51□□□□□ -0.25
SOX2P48431 HIST3H2BA-201ENST00000436555 524 ntBASIC13.51□□□□□ -0.25
SOX2P48431 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.51□□□□□ -0.25
SOX2P48431 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.51□□□□□ -0.25
SOX2P48431 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SOX2P48431 BANF1P1-201ENST00000553684 263 ntBASIC13.51□□□□□ -0.25
SOX2P48431 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.51□□□□□ -0.25
SOX2P48431 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
SOX2P48431 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.51□□□□□ -0.25
SOX2P48431 AC003101.2-201ENST00000612557 442 ntBASIC13.51□□□□□ -0.25
SOX2P48431 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SOX2P48431 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SOX2P48431 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SOX2P48431 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SOX2P48431 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SOX2P48431 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SOX2P48431 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SOX2P48431 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SOX2P48431 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
SOX2P48431 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms