Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
PRPHP41219 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPHP41219 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.24■□□□□ 0.35
PRPHP41219 CICP24-201ENST00000605464 2705 ntBASIC17.24■□□□□ 0.35
PRPHP41219 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRPHP41219 REXO1L5P-201ENST00000622260 2098 ntBASIC17.24■□□□□ 0.35
PRPHP41219 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PRPHP41219 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPHP41219 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPHP41219 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPHP41219 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPHP41219 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPHP41219 ACKR1-201ENST00000368121 1240 ntBASIC17.24■□□□□ 0.35
PRPHP41219 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.24■□□□□ 0.35
PRPHP41219 AL162726.2-201ENST00000438986 1017 ntBASIC17.24■□□□□ 0.35
PRPHP41219 AC114812.1-204ENST00000449669 728 ntBASIC17.24■□□□□ 0.35
PRPHP41219 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.24■□□□□ 0.35
PRPHP41219 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.24■□□□□ 0.35
PRPHP41219 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC17.24■□□□□ 0.35
PRPHP41219 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PRPHP41219 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.24■□□□□ 0.35
PRPHP41219 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC17.24■□□□□ 0.35
PRPHP41219 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPHP41219 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC17.24■□□□□ 0.35
PRPHP41219 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPHP41219 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.24■□□□□ 0.35
PRPHP41219 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPHP41219 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPHP41219 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
PRPHP41219 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.24■□□□□ 0.35
PRPHP41219 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PRPHP41219 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.24■□□□□ 0.35
PRPHP41219 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PRPHP41219 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
PRPHP41219 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRPHP41219 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PRPHP41219 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRPHP41219 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRPHP41219 CICP23-201ENST00000605013 2741 ntBASIC17.23■□□□□ 0.35
PRPHP41219 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRPHP41219 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRPHP41219 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.23■□□□□ 0.35
PRPHP41219 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRPHP41219 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRPHP41219 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRPHP41219 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
PRPHP41219 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.23■□□□□ 0.35
PRPHP41219 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRPHP41219 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.23■□□□□ 0.35
PRPHP41219 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.23■□□□□ 0.35
PRPHP41219 AP001582.1-201ENST00000525856 295 ntBASIC17.23■□□□□ 0.35
PRPHP41219 DUX4L47-201ENST00000566374 394 ntBASIC17.23■□□□□ 0.35
PRPHP41219 AC092364.2-202ENST00000597012 1073 ntBASIC17.23■□□□□ 0.35
PRPHP41219 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.23■□□□□ 0.35
PRPHP41219 AP005019.2-201ENST00000615104 511 ntBASIC17.23■□□□□ 0.35
PRPHP41219 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.23■□□□□ 0.35
PRPHP41219 AL603764.1-201ENST00000636452 321 ntBASIC17.23■□□□□ 0.35
PRPHP41219 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.23■□□□□ 0.35
PRPHP41219 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRPHP41219 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.23■□□□□ 0.35
PRPHP41219 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PRPHP41219 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRPHP41219 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRPHP41219 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PRPHP41219 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
PRPHP41219 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.23■□□□□ 0.35
PRPHP41219 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPHP41219 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PRPHP41219 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPHP41219 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPHP41219 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC17.22■□□□□ 0.35
PRPHP41219 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRPHP41219 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPHP41219 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPHP41219 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPHP41219 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPHP41219 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPHP41219 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PRPHP41219 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPHP41219 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPHP41219 RNU1-114P-201ENST00000365297 166 ntBASIC17.22■□□□□ 0.35
PRPHP41219 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.22■□□□□ 0.35
PRPHP41219 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.22■□□□□ 0.35
PRPHP41219 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.22■□□□□ 0.35
PRPHP41219 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRPHP41219 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PRPHP41219 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.22■□□□□ 0.35
PRPHP41219 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
PRPHP41219 PAM16-204ENST00000571941 674 ntTSL 3 BASIC17.22■□□□□ 0.35
PRPHP41219 CLUHP6-201ENST00000580789 941 ntBASIC17.22■□□□□ 0.35
PRPHP41219 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC17.22■□□□□ 0.35
PRPHP41219 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
PRPHP41219 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRPHP41219 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPHP41219 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPHP41219 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRPHP41219 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRPHP41219 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PRPHP41219 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRPHP41219 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms