Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CTGFP29279 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTGFP29279 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTGFP29279 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CTGFP29279 HLA-DQB1-202ENST00000399079 1501 ntBASIC16.81■□□□□ 0.28
CTGFP29279 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.81■□□□□ 0.28
CTGFP29279 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTGFP29279 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CTGFP29279 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CTGFP29279 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.81■□□□□ 0.28
CTGFP29279 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.81■□□□□ 0.28
CTGFP29279 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTGFP29279 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.81■□□□□ 0.28
CTGFP29279 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
CTGFP29279 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTGFP29279 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTGFP29279 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.81■□□□□ 0.28
CTGFP29279 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.81■□□□□ 0.28
CTGFP29279 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.81■□□□□ 0.28
CTGFP29279 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTGFP29279 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.81■□□□□ 0.28
CTGFP29279 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC16.81■□□□□ 0.28
CTGFP29279 RNF146-211ENST00000609447 607 ntTSL 4 BASIC16.81■□□□□ 0.28
CTGFP29279 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CTGFP29279 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.81■□□□□ 0.28
CTGFP29279 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CTGFP29279 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CTGFP29279 FAS-202ENST00000352159 1722 ntTSL 5 BASIC16.81■□□□□ 0.28
CTGFP29279 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTGFP29279 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.81■□□□□ 0.28
CTGFP29279 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTGFP29279 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.81■□□□□ 0.28
CTGFP29279 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTGFP29279 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CTGFP29279 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTGFP29279 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.8■□□□□ 0.28
CTGFP29279 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.8■□□□□ 0.28
CTGFP29279 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.8■□□□□ 0.28
CTGFP29279 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTGFP29279 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CTGFP29279 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.8■□□□□ 0.28
CTGFP29279 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTGFP29279 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTGFP29279 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CTGFP29279 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
CTGFP29279 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CTGFP29279 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.8■□□□□ 0.28
CTGFP29279 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTGFP29279 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.8■□□□□ 0.28
CTGFP29279 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.8■□□□□ 0.28
CTGFP29279 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTGFP29279 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.8■□□□□ 0.28
CTGFP29279 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC16.8■□□□□ 0.28
CTGFP29279 AL354861.1-201ENST00000445213 355 ntBASIC16.8■□□□□ 0.28
CTGFP29279 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTGFP29279 AGPAT5P1-201ENST00000455855 1019 ntBASIC16.8■□□□□ 0.28
CTGFP29279 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CTGFP29279 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CTGFP29279 AL118516.1-201ENST00000564152 670 ntBASIC16.8■□□□□ 0.28
CTGFP29279 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC16.8■□□□□ 0.28
CTGFP29279 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC16.8■□□□□ 0.28
CTGFP29279 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.8■□□□□ 0.28
CTGFP29279 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC16.8■□□□□ 0.28
CTGFP29279 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTGFP29279 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CTGFP29279 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.8■□□□□ 0.28
CTGFP29279 AC105250.1-201ENST00000509378 2057 ntBASIC16.8■□□□□ 0.28
CTGFP29279 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTGFP29279 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC16.8■□□□□ 0.28
CTGFP29279 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTGFP29279 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTGFP29279 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CTGFP29279 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTGFP29279 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CTGFP29279 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CTGFP29279 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTGFP29279 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CTGFP29279 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CTGFP29279 AC007292.2-201ENST00000593524 1812 ntBASIC16.8■□□□□ 0.28
CTGFP29279 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTGFP29279 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.79■□□□□ 0.28
CTGFP29279 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.79■□□□□ 0.28
CTGFP29279 AC023090.2-201ENST00000625182 2110 ntBASIC16.79■□□□□ 0.28
CTGFP29279 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTGFP29279 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTGFP29279 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTGFP29279 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CTGFP29279 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTGFP29279 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTGFP29279 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTGFP29279 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC16.79■□□□□ 0.28
CTGFP29279 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC16.79■□□□□ 0.28
CTGFP29279 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CTGFP29279 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.79■□□□□ 0.28
CTGFP29279 AC084752.1-201ENST00000509766 622 ntBASIC16.79■□□□□ 0.28
CTGFP29279 AC114947.1-202ENST00000514136 344 ntBASIC16.79■□□□□ 0.28
CTGFP29279 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC16.79■□□□□ 0.28
CTGFP29279 NUDT4P2-201ENST00000578341 546 ntBASIC16.79■□□□□ 0.28
CTGFP29279 EIF5AP2-201ENST00000585668 1047 ntBASIC16.79■□□□□ 0.28
CTGFP29279 HKR1-225ENST00000592168 566 ntTSL 4 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms