Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
LAMA1P25391 CYP4F23P-201ENST00000593402 1579 ntBASIC14.58□□□□□ -0.07
LAMA1P25391 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
LAMA1P25391 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LAMA1P25391 AL138725.1-201ENST00000407347 1314 ntBASIC14.58□□□□□ -0.07
LAMA1P25391 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
LAMA1P25391 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
LAMA1P25391 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
LAMA1P25391 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.07
LAMA1P25391 C2orf69P1-201ENST00000563532 1093 ntBASIC14.58□□□□□ -0.07
LAMA1P25391 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.58□□□□□ -0.07
LAMA1P25391 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.58□□□□□ -0.07
LAMA1P25391 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LAMA1P25391 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
LAMA1P25391 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.58□□□□□ -0.08
LAMA1P25391 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LAMA1P25391 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.58□□□□□ -0.08
LAMA1P25391 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LAMA1P25391 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.58□□□□□ -0.08
LAMA1P25391 AL096772.1-201ENST00000451135 781 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LAMA1P25391 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.58□□□□□ -0.08
LAMA1P25391 AC009884.2-201ENST00000603110 324 ntBASIC14.58□□□□□ -0.08
LAMA1P25391 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.58□□□□□ -0.08
LAMA1P25391 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LAMA1P25391 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LAMA1P25391 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
LAMA1P25391 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LAMA1P25391 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LAMA1P25391 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.58□□□□□ -0.08
LAMA1P25391 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LAMA1P25391 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LAMA1P25391 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC14.57□□□□□ -0.08
LAMA1P25391 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LAMA1P25391 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC14.57□□□□□ -0.08
LAMA1P25391 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LAMA1P25391 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.57□□□□□ -0.08
LAMA1P25391 AC090857.1-201ENST00000527400 390 ntBASIC14.57□□□□□ -0.08
LAMA1P25391 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC14.57□□□□□ -0.08
LAMA1P25391 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC14.57□□□□□ -0.08
LAMA1P25391 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LAMA1P25391 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
LAMA1P25391 NUDT4P2-201ENST00000578341 546 ntBASIC14.57□□□□□ -0.08
LAMA1P25391 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC14.57□□□□□ -0.08
LAMA1P25391 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LAMA1P25391 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
LAMA1P25391 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LAMA1P25391 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
LAMA1P25391 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
LAMA1P25391 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.57□□□□□ -0.08
LAMA1P25391 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.57□□□□□ -0.08
LAMA1P25391 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.57□□□□□ -0.08
LAMA1P25391 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.57□□□□□ -0.08
LAMA1P25391 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.57□□□□□ -0.08
LAMA1P25391 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LAMA1P25391 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LAMA1P25391 AC148477.9-201ENST00000623974 539 ntBASIC14.57□□□□□ -0.08
LAMA1P25391 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.57□□□□□ -0.08
LAMA1P25391 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LAMA1P25391 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LAMA1P25391 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.57□□□□□ -0.08
LAMA1P25391 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.57□□□□□ -0.08
LAMA1P25391 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.57□□□□□ -0.08
LAMA1P25391 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LAMA1P25391 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
LAMA1P25391 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LAMA1P25391 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LAMA1P25391 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LAMA1P25391 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LAMA1P25391 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LAMA1P25391 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LAMA1P25391 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.57□□□□□ -0.08
LAMA1P25391 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LAMA1P25391 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.57□□□□□ -0.08
LAMA1P25391 AP000356.3-201ENST00000382243 753 ntBASIC14.57□□□□□ -0.08
LAMA1P25391 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.57□□□□□ -0.08
LAMA1P25391 DBET-201ENST00000630918 3363 ntBASIC14.57□□□□□ -0.08
LAMA1P25391 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LAMA1P25391 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.56□□□□□ -0.08
LAMA1P25391 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LAMA1P25391 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
LAMA1P25391 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
LAMA1P25391 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LAMA1P25391 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LAMA1P25391 FAM90A2P-201ENST00000511144 1395 ntBASIC14.56□□□□□ -0.08
LAMA1P25391 FAM90A25P-201ENST00000528404 1395 ntBASIC14.56□□□□□ -0.08
LAMA1P25391 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC14.56□□□□□ -0.08
LAMA1P25391 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LAMA1P25391 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
LAMA1P25391 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.56□□□□□ -0.08
LAMA1P25391 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LAMA1P25391 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LAMA1P25391 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LAMA1P25391 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.56□□□□□ -0.08
LAMA1P25391 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC14.56□□□□□ -0.08
LAMA1P25391 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.56□□□□□ -0.08
LAMA1P25391 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
LAMA1P25391 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
LAMA1P25391 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC14.56□□□□□ -0.08
LAMA1P25391 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC14.56□□□□□ -0.08
LAMA1P25391 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms