Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CCND1P24385 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.47■□□□□ 0.07
CCND1P24385 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC15.47■□□□□ 0.07
CCND1P24385 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.47■□□□□ 0.07
CCND1P24385 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC15.47■□□□□ 0.07
CCND1P24385 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.47■□□□□ 0.07
CCND1P24385 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.47■□□□□ 0.07
CCND1P24385 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CCND1P24385 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 AL139400.1-201ENST00000366220 510 ntBASIC15.47■□□□□ 0.07
CCND1P24385 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CCND1P24385 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.47■□□□□ 0.07
CCND1P24385 MTND6P24-201ENST00000440466 518 ntBASIC15.47■□□□□ 0.07
CCND1P24385 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.47■□□□□ 0.07
CCND1P24385 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC15.47■□□□□ 0.07
CCND1P24385 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CCND1P24385 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC15.47■□□□□ 0.07
CCND1P24385 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.47■□□□□ 0.07
CCND1P24385 AL133215.2-201ENST00000609242 977 ntBASIC15.47■□□□□ 0.07
CCND1P24385 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.47■□□□□ 0.07
CCND1P24385 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CCND1P24385 CETN4P-206ENST00000642099 2168 ntBASIC15.47■□□□□ 0.07
CCND1P24385 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.47■□□□□ 0.07
CCND1P24385 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 KRT8P12-202ENST00000472924 1397 ntBASIC15.47■□□□□ 0.07
CCND1P24385 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.47■□□□□ 0.07
CCND1P24385 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.47■□□□□ 0.07
CCND1P24385 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.47■□□□□ 0.07
CCND1P24385 ZBED1P1-201ENST00000502364 1930 ntBASIC15.47■□□□□ 0.07
CCND1P24385 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CCND1P24385 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC15.46■□□□□ 0.07
CCND1P24385 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCND1P24385 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCND1P24385 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCND1P24385 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCND1P24385 TUBB3P1-201ENST00000405796 1332 ntBASIC15.46■□□□□ 0.07
CCND1P24385 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.46■□□□□ 0.07
CCND1P24385 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCND1P24385 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC15.46■□□□□ 0.07
CCND1P24385 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC15.46■□□□□ 0.07
CCND1P24385 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCND1P24385 USP31-203ENST00000567975 2142 ntTSL 2 BASIC15.46■□□□□ 0.07
CCND1P24385 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.46■□□□□ 0.07
CCND1P24385 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.46■□□□□ 0.07
CCND1P24385 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCND1P24385 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCND1P24385 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCND1P24385 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCND1P24385 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCND1P24385 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCND1P24385 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC15.46■□□□□ 0.07
CCND1P24385 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCND1P24385 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCND1P24385 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCND1P24385 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.46■□□□□ 0.07
CCND1P24385 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCND1P24385 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CCND1P24385 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
CCND1P24385 PHKG1P2-201ENST00000457537 863 ntBASIC15.46■□□□□ 0.07
CCND1P24385 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.46■□□□□ 0.07
CCND1P24385 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.46■□□□□ 0.07
CCND1P24385 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.46■□□□□ 0.07
CCND1P24385 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.46■□□□□ 0.07
CCND1P24385 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC15.46■□□□□ 0.07
CCND1P24385 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.46■□□□□ 0.07
CCND1P24385 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.46■□□□□ 0.07
CCND1P24385 Z92544.3-201ENST00000624747 417 ntBASIC15.46■□□□□ 0.07
CCND1P24385 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCND1P24385 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.46■□□□□ 0.07
CCND1P24385 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.46■□□□□ 0.07
CCND1P24385 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CCND1P24385 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCND1P24385 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.46■□□□□ 0.07
CCND1P24385 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.46■□□□□ 0.07
CCND1P24385 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.46■□□□□ 0.07
CCND1P24385 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CCND1P24385 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.46■□□□□ 0.07
CCND1P24385 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CCND1P24385 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms