Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NFKB1P19838 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.55■□□□□ 0.08
NFKB1P19838 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NFKB1P19838 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.55■□□□□ 0.08
NFKB1P19838 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.55■□□□□ 0.08
NFKB1P19838 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.55■□□□□ 0.08
NFKB1P19838 AC093813.1-201ENST00000605066 256 ntBASIC15.55■□□□□ 0.08
NFKB1P19838 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.55■□□□□ 0.08
NFKB1P19838 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.55■□□□□ 0.08
NFKB1P19838 AC007431.3-201ENST00000623221 587 ntBASIC15.55■□□□□ 0.08
NFKB1P19838 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NFKB1P19838 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NFKB1P19838 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.55■□□□□ 0.08
NFKB1P19838 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NFKB1P19838 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NFKB1P19838 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.55■□□□□ 0.08
NFKB1P19838 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NFKB1P19838 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NFKB1P19838 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NFKB1P19838 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NFKB1P19838 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.54■□□□□ 0.08
NFKB1P19838 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.54■□□□□ 0.08
NFKB1P19838 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.54■□□□□ 0.08
NFKB1P19838 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.54■□□□□ 0.08
NFKB1P19838 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NFKB1P19838 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NFKB1P19838 AL391825.1-201ENST00000457671 1364 ntBASIC15.54■□□□□ 0.08
NFKB1P19838 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NFKB1P19838 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NFKB1P19838 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.54■□□□□ 0.08
NFKB1P19838 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 C1QBPP1-201ENST00000400117 770 ntBASIC15.54■□□□□ 0.08
NFKB1P19838 HLA-K-203ENST00000430151 1046 ntBASIC15.54■□□□□ 0.08
NFKB1P19838 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.54■□□□□ 0.08
NFKB1P19838 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.54■□□□□ 0.08
NFKB1P19838 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.54■□□□□ 0.08
NFKB1P19838 AC092552.1-201ENST00000547243 906 ntBASIC15.54■□□□□ 0.08
NFKB1P19838 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.54■□□□□ 0.08
NFKB1P19838 AL359711.2-201ENST00000563105 872 ntBASIC15.54■□□□□ 0.08
NFKB1P19838 AC124283.3-201ENST00000570869 594 ntBASIC15.54■□□□□ 0.08
NFKB1P19838 MIR4745-201ENST00000577608 62 ntBASIC15.54■□□□□ 0.08
NFKB1P19838 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.54■□□□□ 0.08
NFKB1P19838 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.54■□□□□ 0.08
NFKB1P19838 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NFKB1P19838 CICP14-201ENST00000629111 2732 ntBASIC15.54■□□□□ 0.08
NFKB1P19838 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NFKB1P19838 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
NFKB1P19838 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NFKB1P19838 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.53■□□□□ 0.08
NFKB1P19838 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.53■□□□□ 0.08
NFKB1P19838 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
NFKB1P19838 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
NFKB1P19838 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.53■□□□□ 0.08
NFKB1P19838 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.53■□□□□ 0.08
NFKB1P19838 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
NFKB1P19838 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.53■□□□□ 0.08
NFKB1P19838 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
NFKB1P19838 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NFKB1P19838 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.53■□□□□ 0.08
NFKB1P19838 AC087499.6-201ENST00000411576 835 ntBASIC15.53■□□□□ 0.08
NFKB1P19838 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.53■□□□□ 0.08
NFKB1P19838 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.53■□□□□ 0.08
NFKB1P19838 AL442647.2-201ENST00000429864 857 ntBASIC15.53■□□□□ 0.08
NFKB1P19838 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.53■□□□□ 0.08
NFKB1P19838 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.53■□□□□ 0.08
NFKB1P19838 MYCLP2-201ENST00000449268 967 ntBASIC15.53■□□□□ 0.08
NFKB1P19838 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms