Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC20.58■□□□□ 0.88
ATF3P18847 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATF3P18847 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
ATF3P18847 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
ATF3P18847 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATF3P18847 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATF3P18847 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
ATF3P18847 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
ATF3P18847 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
ATF3P18847 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
ATF3P18847 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATF3P18847 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC20.57■□□□□ 0.88
ATF3P18847 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATF3P18847 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATF3P18847 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATF3P18847 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ATF3P18847 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC20.57■□□□□ 0.88
ATF3P18847 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATF3P18847 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATF3P18847 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ATF3P18847 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATF3P18847 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ATF3P18847 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATF3P18847 FAM86KP-201ENST00000509817 987 ntBASIC20.57■□□□□ 0.88
ATF3P18847 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC20.57■□□□□ 0.88
ATF3P18847 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC20.57■□□□□ 0.88
ATF3P18847 DGAT2L7P-201ENST00000602462 744 ntBASIC20.57■□□□□ 0.88
ATF3P18847 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC20.57■□□□□ 0.88
ATF3P18847 DDX5-235ENST00000630471 473 ntTSL 4 BASIC20.57■□□□□ 0.88
ATF3P18847 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATF3P18847 LINC02447-202ENST00000501888 2146 ntBASIC20.57■□□□□ 0.88
ATF3P18847 CROCCP1-201ENST00000426910 5675 ntBASIC20.57■□□□□ 0.88
ATF3P18847 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATF3P18847 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATF3P18847 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATF3P18847 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATF3P18847 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATF3P18847 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATF3P18847 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATF3P18847 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATF3P18847 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATF3P18847 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.56■□□□□ 0.88
ATF3P18847 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATF3P18847 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATF3P18847 HLA-DMA-203ENST00000395305 777 ntBASIC20.56■□□□□ 0.88
ATF3P18847 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATF3P18847 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC20.56■□□□□ 0.88
ATF3P18847 XBP1P1-201ENST00000436573 652 ntBASIC20.56■□□□□ 0.88
ATF3P18847 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATF3P18847 LINC00634-202ENST00000505157 222 ntBASIC20.56■□□□□ 0.88
ATF3P18847 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC20.56■□□□□ 0.88
ATF3P18847 ALG3P1-201ENST00000508806 1114 ntBASIC20.56■□□□□ 0.88
ATF3P18847 MT3-203ENST00000565838 421 ntTSL 3 BASIC20.56■□□□□ 0.88
ATF3P18847 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC20.56■□□□□ 0.88
ATF3P18847 CMC2-224ENST00000630396 481 ntTSL 5 BASIC20.56■□□□□ 0.88
ATF3P18847 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATF3P18847 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATF3P18847 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ATF3P18847 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATF3P18847 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATF3P18847 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATF3P18847 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATF3P18847 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC20.56■□□□□ 0.88
ATF3P18847 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATF3P18847 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATF3P18847 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ATF3P18847 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ATF3P18847 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.55■□□□□ 0.88
ATF3P18847 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
ATF3P18847 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ATF3P18847 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATF3P18847 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC20.55■□□□□ 0.88
ATF3P18847 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATF3P18847 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATF3P18847 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.55■□□□□ 0.88
ATF3P18847 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATF3P18847 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATF3P18847 GCSHP3-201ENST00000431120 391 ntBASIC20.55■□□□□ 0.88
ATF3P18847 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC20.55■□□□□ 0.88
ATF3P18847 DDX39AP1-201ENST00000445147 1181 ntBASIC20.55■□□□□ 0.88
ATF3P18847 AL035414.1-201ENST00000451327 857 ntBASIC20.55■□□□□ 0.88
ATF3P18847 RN7SL396P-201ENST00000471086 295 ntBASIC20.55■□□□□ 0.88
ATF3P18847 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC20.55■□□□□ 0.88
ATF3P18847 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC20.55■□□□□ 0.88
ATF3P18847 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATF3P18847 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC20.55■□□□□ 0.88
ATF3P18847 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC20.55■□□□□ 0.88
ATF3P18847 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC20.55■□□□□ 0.88
ATF3P18847 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATF3P18847 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC20.55■□□□□ 0.88
ATF3P18847 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATF3P18847 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC20.55■□□□□ 0.88
ATF3P18847 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATF3P18847 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
ATF3P18847 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.55■□□□□ 0.88
ATF3P18847 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ATF3P18847 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATF3P18847 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATF3P18847 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
ATF3P18847 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms